Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1466 ATGGAGATTCTGGGTCAAAAAGAAGGAATGCATTCTGTTGTACATGTACAAAAACTACTTGATCAATTTTCATGTGGAAATGACTATGCCTTGAAGGCAAGGAAACCATATACTATCACAAAGCAGAGAGAGAAGTGGACAGATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGCTGTATGGCCGAGCTTGGCGAAAAATCGAAGAACATGTTGGCACAAAGACTGCTGTGCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGATCCATCGAGACACTAATGGGAACGACACAACCATGGTGGAGTCTATTGAAATTCCACCTCCACGACCGAAAAGAAAGCCGGTTCATCCTTATCCGCGTAAACTAGTAGAAATCCCAAAGAATGAAATCTCCAACTTGGAACAACCGTTGAGGTCTAATTCACTCGTGTCGTTAGATTTTGGTCAAGAAAACAAGTCTCCAAAGTCGGTACTGTCCGCAGTTGCTTCAGAAATCCTTGGTTTCTCTGATTCGGATACCCCAACCAGAAGTTTGTCCCCTGTCTCATCCTTTAGTGCTATGCATACCAGTAGATATCCACTTCTTGAGTCCAAATCATCATCATCTGAGGAAGATTTGTCTCAACAAATAGATGAAATGAATGTCGGCTCAGCTCATGATGAACAACCTCTAGTGAAATTGGAGCTTTTCCCTAAAGAATGTGTCGTTACCAATGAAGTAGCAGCAGAAGAATCACCTTGTCGAACTCTCAAACTTTTTGGAACAACTCTATTAGTAAAAGATACCTGCAAACCTTCTACATCAACGGACGCTTCCGAACCTATTCCTGCTATGCAGCAACTTCAGCGTGGTTGTTCAGATATTAGTCTTGCAACTGTTGTTCCTTGGTGGACAATTTCAGACAATTCGGCCTTCAAGCCACTGCACAAGGAGCCCGAAGGAAAGCATCTACATTCAAATCATGGTGAATGCGAAGATAAAGAAATTCAAAAGGAAGGATCTTCTTGCGTTGGCTCTAATAGCACTAGTTCAATCAATGACGAAGAAAGCAATGAAAGATTCGATGATCAAGCCAAAAGTGATCATGTGAATTACTTTATTGGCCACACTACACTAAGTGAAACAGTGAGACTTAAAACCTTTGGAAAAGGGTTTGTACCATATAAAAGGTGCGTGGCAGAAAGAGAAAGACAGTGTTCAACAATAACAGATGAGAGGAGGGAACATCAACGAATGAGGCTTTCCTTATAG 1260 0.4111 MEILGQKEGMHSVVHVQKLLDQFSCGNDYALKARKPYTITKQREKWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTAVQIRSHAQKFFSKIHRDTNGNDTTMVESIEIPPPRPKRKPVHPYPRKLVEIPKNEISNLEQPLRSNSLVSLDFGQENKSPKSVLSAVASEILGFSDSDTPTRSLSPVSSFSAMHTSRYPLLESKSSSSEEDLSQQIDEMNVGSAHDEQPLVKLELFPKECVVTNEVAAEESPCRTLKLFGTTLLVKDTCKPSTSTDASEPIPAMQQLQRGCSDISLATVVPWWTISDNSAFKPLHKEPEGKHLHSNHGECEDKEIQKEGSSCVGSNSTSSINDEESNERFDDQAKSDHVNYFIGHTTLSETVRLKTFGKGFVPYKRCVAERERQCSTITDERREHQRMRLSL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1466 419 MobiDBLite consensus disorder prediction 98 120 - -
Mal8g1466 419 MobiDBLite consensus disorder prediction 315 359 - -
Mal8g1466 419 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 41 90 IPR006447 GO:0003677
Mal8g1466 419 CDD SANT 45 88 IPR001005 -
Mal8g1466 419 Gene3D - 45 92 - -
Mal8g1466 419 Pfam Myb-like DNA-binding domain 43 86 IPR001005 -
Mal8g1466 419 SMART sant 42 90 IPR001005 -
Mal8g1466 419 PANTHER PROTEIN REVEILLE 7-RELATED 19 406 - -
Mal8g1466 419 MobiDBLite consensus disorder prediction 336 350 - -
Mal8g1466 419 ProSiteProfiles Myb-like domain profile. 38 88 IPR001005 -
Mal8g1466 419 MobiDBLite consensus disorder prediction 315 335 - -
Mal8g1466 419 PANTHER SWI/SNF COMPLEX-RELATED 19 406 - -
Mal8g1466 419 ProSiteProfiles SANT domain profile. 41 92 IPR017884 -
Mal8g1466 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 92 IPR017930 -
Mal8g1466 419 SUPERFAMILY Homeodomain-like 37 92 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1466 Mal-Chr8 28048343 28051037 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal8g1466 Myb_DNA-binding 3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1466 - - gmx:778060 494.197