Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1465 ATGTCTTCATCGGAGCCTAAGTACGACATCCCTCCGGCCCCAACATACAAGACTCCACCGGCACTAGTAGCGTTCACCCTCACCGTCCTCATCCTATGCTTTGTGGCTTTCAGCGTAGTTTATCTTTGCAAGTATTGTTTTGCAGGCATTTTCCACACTTGGGCCTTACAACGCACGGCCTCAGGATCCCTCGTTCGTCTCTCACCTGAGAGGTCACCCCCTAGAGGACTCGACAATAATCTTCTAGAAAAATTCCCCACTTTCCTCTACTCCTCCGTGAAAGACCTACGCAAGGAAAAGAGCTATAGCTTAGAATGTGCCATTTGCTTGTTAGAGTTCGAGGATGATAGCATGCTTCGTCTCCTAACCATTTGCTGTCATGTTTTCCACCAAGAATGTGTTGACCTATGGCTTGAATCTCATAAGACATGTCCTGTTTGTCGAACCGACCTTGATTCACCTCCCGACCAAATGACAAAACACGGGGAATGTAACCACAACAACAACAACAACAACCTTAATGCACAAGAGGGTATGTCGTCTTTACCGTGCGATGATATACACATTGATATTAGAGGAGAGGAAAGTGGCAATGTTGGTGAGATCACTAGAGCTCAAATACATGAAGGTGATCAACATGATCATCAAGTGGGTATGAGCATGCAACAACAAGAAGAGAATAGATTTTCAAGGTCACATTCAACAGGGCATTCTATAGTAATGATTAGAGGTGAAGAAAAAGATGATGACAAATACACATTGAGATTGCCTGAACATGTTATAAAGGGAGGGCACAATATCACGAGGAGTTGTACAAATTACAACGAGATGACATTGACAATGCCTACACCATGTAGTAATTGTGGTTTTGTTAAACCGGTAATTGGCTCCTCTTCACTTGTTCAAGCTCAAGAGGCTTGA 921 0.4376 MSSSEPKYDIPPAPTYKTPPALVAFTLTVLILCFVAFSVVYLCKYCFAGIFHTWALQRTASGSLVRLSPERSPPRGLDNNLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFEDDSMLRLLTICCHVFHQECVDLWLESHKTCPVCRTDLDSPPDQMTKHGECNHNNNNNNLNAQEGMSSLPCDDIHIDIRGEESGNVGEITRAQIHEGDQHDHQVGMSMQQQEENRFSRSHSTGHSIVMIRGEEKDDDKYTLRLPEHVIKGGHNITRSCTNYNEMTLTMPTPCSNCGFVKPVIGSSSLVQAQEA* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1465 306 Pfam Ring finger domain 105 148 IPR001841 -
Mal8g1465 306 CDD RING-H2_EL5_like 105 148 - -
Mal8g1465 306 SUPERFAMILY RING/U-box 82 155 - -
Mal8g1465 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 154 IPR013083 -
Mal8g1465 306 PANTHER RING FINGER DOMAIN-CONTAINING 3 277 - -
Mal8g1465 306 PANTHER RING-H2 FINGER PROTEIN ATL29 3 277 - -
Mal8g1465 306 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Mal8g1465 306 SMART ring_2 106 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1465 Mal-Chr8 28030341 28031261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1465 20 270 Rapid Response to Elicitors AT2G35000 33.977 8.37e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1465 - - gmx:100815505 347.436