Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1453 ATGGTTCTATCGGAAACGGCAACCCATATGGACGCTTCTGTCCATTCAACATTTGCCTCTCGCTATGTCCGCACATCCCTTCCCAGGTTCAAGATGGGGGAGCATTCGATCCCAAAGGAAGCAGCGTATCAGATCATAAACGACGAGTTGATGCTGGACGGTAACCCTAGGCTGAACTTGGCCTCATTCGTGACAACATGGATGGAGCCAGAATGTGATAAACTCATCATGGCTTCCATTAACAAAAACTATGTCGACATGGATGAGTACCCTGTCACCACTGAGCTACAGAACCGTTGTGTTAACATGATAGCTCATCTTTTCAATGCACCACTTGAAGAGTCAGAACCTGCAGTTGGTGTTGGCACTGTTGGCTCATCAGAGGCCATAATGTTAGCTGGATTAGCATTCAAGAGGAAGTGGCAAAACAGAAGGAAAAGTGAAGGGAAGTCTTGTGACAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAACTGAAAGAGGTGAAGCTGAGAGATGGATACTATGTAATGGACCCTGAAAAAGCTGTGGAAATGGTGGATGAGAACACTATTTGTGTTGCTGCTATTCTTGGTTCCACACTAAACGGAGAATTCGAAGATGTCAAGCGCTTAAATGATCTCCTAATAGAAAAAAATACCGAAACTGGTTGGGAGACACCAATTCATGTGGATGCAGCAAGTGGTGGATTCATTGCACCATTTCTTTATCCAGAGCTTGAATGGGACTTTCGTTTACCACTTGTGAAGAGTATTAATGTAAGTGGACACAAATATGGTCTAGTCTATGCTGGTATAGGTTGGGTTATCTGGAGAAGCAAAGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTACCTTGGAGCTGACCAACCCACCTTCACTCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTGATTCGTTTGGGTCATGAGGGATATAGAAATGTGATGGAAAACTGTAGAGACAACATGATCGTGCTTAAGGACAGACTGGAGAAAATGGGTCGGTTTGACATTGTATCCAAAGATGAGGGTGTACCATTAGTGGCCTTTACTTTGAAGGACCACAACCACTTTAACGAATTCCAAATCTCTGATATGCTGAAGCGCTTTGGTTGGATAGTCCCGGCATACACCATGCCACCGGATGCACAACACGTGACAGTGCTCCGTGTTGTGATCAGGGAGGACTTCTCACGCACCTTTGCAGAGCGTCTTGTTATTGACATCACCAAGGTGATCCACGACCTTGATTTGACTCCTGCGAGGGTAGTCAGTACAAACACCATAACAGTTACCGGAGAAGAAGATGCAAATGATGGGGGCAAAGTAACGATGAGTGTTTTGGAAACTCAAAGGAAAATCACTACAGCTTGGAAGAAATTTGTGATGGACAGGAAGAAGACAAATGGTGTTTGTTAA 1503 0.4451 MVLSETATHMDASVHSTFASRYVRTSLPRFKMGEHSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKSEGKSCDNPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNTETGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRDNMIVLKDRLEKMGRFDIVSKDEGVPLVAFTLKDHNHFNEFQISDMLKRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTFAERLVIDITKVIHDLDLTPARVVSTNTITVTGEEDANDGGKVTMSVLETQRKITTAWKKFVMDRKKTNGVC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1453 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mal8g1453 500 Gene3D - 361 448 - -
Mal8g1453 500 PANTHER GLUTAMATE DECARBOXYLASE 1 498 - -
Mal8g1453 500 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mal8g1453 500 SUPERFAMILY PLP-dependent transferases 14 443 IPR015424 -
Mal8g1453 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mal8g1453 500 Gene3D - 1 65 - -
Mal8g1453 500 Gene3D - 66 360 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1453 Mal-Chr8 27878665 27884375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1453 1 500 Calmodulin-binding Proteins AT5G17330 83.466 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1453 K01580 - gmx:100791696 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3119 2 44348134 44356077 Mal8g1453 8 27878665 27884375 PCT