LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal8g1452	ATGTCTCAGCTTTCTCTCTCCTTCTTCTTCTGTCTTACCTTTTTCACCTTCTCAATAATCGCTTCCACCGAATTCGACTTCGGAACCTTAACACTCACAAGCCTCAAACTTCTCGGCGACGCTCATCTCAACAACGGCACCGTCACACTCACACGTGACCTCACCGTTCCATTTTCCGGCGCCGGTCAAGCCTTATACTCCCGTCCCATCAGATTCCGGCAACCTGGCACCACCACTCCGGCGAGCTTCACCACCTTCTTTTCTTTCTCTGTCACCAATTTGAACCCTTCTTCCATCGGCGGTGGACTTGCGTTTGTAATCTCGCCGGATGATGACTCTCTTGGTGACGCCGGTGGTTATCTTGGTCTTGCCGGAAATGGGTTTGTGGCGGTTGAATTTGATACTCTTATGGATGTTGAGTTTAAGGATATTAATGGGAACCATGTTGGGGTTGATTTGAATAGTGTTGTTTCTAGTAAAGTTGGTGACTTGGATTCAATTGGGGTTGATCTTAAGAGTGGTGATAGTGTGAATGCTTGGATTGAATTTGATGGATCTAGTAATGGGTTTAGTGTTTGGGTTTCTTACTCTAATTTGAAGCCTAAAGATCCAATTTTGACTATGAATCTTGATATGGGTATGTATTTGAATGATTTTATGTATGTTGGGTTTTCTGGTTCAACTCAAGGCAGTACTGAGATTCATAGGATTGAATGGTGGAGTTTTAGTTCATCTTTTGTGACGGGTTCAGGTAGTTCGGGAGGTTTGCCGCCTCCTCCAGCAGTTAGTTTGATGAATACAACGGCGAATTCAGCGAGGTCGCCGCCTCCTTCTATTGCTCCTACAATGAATTCTTCAAATGAAGAAAGAAAAGAGAGTAAGAAGAATTGTCATAATGGGTTGTGTAAGCAGGGTTTGGGAGCTGTTGCTGGTGTTGTTACTGCTAGTGCTTTTGTTTTAGCACTTTTTGCTGGGTCCATGATTTGGTTGTACTCTAAGAAAGTGAAGCGTGTGAGTAGATTTGATTCGCTTGGATCGGAGATAATAAAAATGCCTAAGCAGTTTAGTTACAAGGAGCTTAAATCTGCTACAAAGTGTTTCAATGCTAATAGGATTATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGAATTTTGACTGAGAATGGTGACATTATTGCTGTGAAGAGGTGTAGTCATAGTAGTCAAGGTAAGAATGAGTTTTTATCTGAGTTGTCTATAATTGGTAGCCTTAGACATCGGAATCTTGTTAGACTTCAAGGATGGTGTCATGAGAAAGGTGAGATTTTGTTGGTGTATGATTTGATGCCTAATGGCAGTTTGGATAAGGCATTGTTTGAGGCTAGAACGCCTCTCCCGTGGTCTCACCGCCGCAAGATTTTGTTGGGTGTGGCGTCCGCTTTGGCTTACTTGCATCAAGAGTGTGAAAATCAGGTAATTCATAGAGACATTAAGACTAGTAACATAATGTTGGACGAAGGGTTCAACGCACGTTTGGGAGATTTTGGATTAGCAAGGCAAACTGAGCATGACAAGTCTCCGGATGCCACAGTGGCTGCCGGAACAATGGGGTATCTAGCACCCGAGTATCTCCTTACAGGTAAAGCCACTGACAAAACTGACGTGTTTAGTTATGGTGCTGTGGTTCTTGAGGTGGCTAGTGGGAGGAGACCTATAGAGAAAGATGCTGCTGGTGTTGGTAAAGTTGGAGTGAGTAGCAATTTGGTAGAATGGGTTTGGAGTTTACATAGGGAAGGAAGATTGTTAACGGCGGTTGATCCACGGCTCGAGGGTGAGTTCGATGAAGCGGGGATGAGAAGGGTACTCTTGGTTGGGTTAGCTTGCTCACACCCTGATCCTTTGGCTAGACCAACAATGAGAAGCGTGGTTCAGATGCTAGGGGGTGAAGCTGAAGTGCCAATTGTCCCGAGAACGAAGCCTACGGGTCTCAGTACTTCACACTCTCACCTCTTAATGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACTTCCACATCGGAGAACAGCTTCAATGGTGGAGATATAGTCTGA	2091	0.4443	MSQLSLSFFFCLTFFTFSIIASTEFDFGTLTLTSLKLLGDAHLNNGTVTLTRDLTVPFSGAGQALYSRPIRFRQPGTTTPASFTTFFSFSVTNLNPSSIGGGLAFVISPDDDSLGDAGGYLGLAGNGFVAVEFDTLMDVEFKDINGNHVGVDLNSVVSSKVGDLDSIGVDLKSGDSVNAWIEFDGSSNGFSVWVSYSNLKPKDPILTMNLDMGMYLNDFMYVGFSGSTQGSTEIHRIEWWSFSSSFVTGSGSSGGLPPPPAVSLMNTTANSARSPPPSIAPTMNSSNEERKESKKNCHNGLCKQGLGAVAGVVTASAFVLALFAGSMIWLYSKKVKRVSRFDSLGSEIIKMPKQFSYKELKSATKCFNANRIIGHGAFGTVYKGILTENGDIIAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATDKTDVFSYGAVVLEVASGRRPIEKDAAGVGKVGVSSNLVEWVWSLHREGRLLTAVDPRLEGEFDEAGMRRVLLVGLACSHPDPLARPTMRSVVQMLGGEAEVPIVPRTKPTGLSTSHSHLLMSLQDSVSDCDGIITISTSTSENSFNGGDIV*	697

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal8g1452	696	ProSiteProfiles	Protein kinase domain profile.	367	649	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal8g1452	696	SMART	serkin_6	367	640	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal8g1452	696	CDD	STKc_IRAK	373	640	-	-
	Mal8g1452	696	Gene3D	Transferase(Phosphotransferase) domain 1	443	646	-	-
	Mal8g1452	696	SUPERFAMILY	Protein kinase-like (PK-like)	349	662	IPR011009	-
	Mal8g1452	696	ProSitePatterns	Legume lectins beta-chain signature.	129	135	IPR019825	-
	Mal8g1452	696	SUPERFAMILY	Concanavalin A-like lectins/glucanases	21	254	IPR013320	-
	Mal8g1452	696	MobiDBLite	consensus disorder prediction	267	286	-	-
	Mal8g1452	696	MobiDBLite	consensus disorder prediction	267	293	-	-
	Mal8g1452	696	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2	21	689	-	-
	Mal8g1452	696	Gene3D	-	20	253	-	-
	Mal8g1452	696	ProSitePatterns	Protein kinases ATP-binding region signature.	373	396	IPR017441	GO:0005524
	Mal8g1452	696	Gene3D	Phosphorylase Kinase; domain 1	330	442	-	-
	Mal8g1452	696	Pfam	Protein kinase domain	368	570	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal8g1452	696	PANTHER	-	21	689	-	-
	Mal8g1452	696	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	486	498	IPR008271	GO:0004672\|GO:0006468
	Mal8g1452	696	Pfam	Legume lectin domain	23	245	IPR001220	GO:0030246
	Mal8g1452	696	CDD	lectin_legume_LecRK_Arcelin_ConA	39	246	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal8g1452	Mal-Chr8	27874896	27876986	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal8g1452	4	678	Receptor kinase-like Gene Family	AT3G53380	70.349	0.0	927

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mal8g1452		Pkinase	2.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal8g1452	-		-	gmx:100793157	1095.88