Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1436 ATGAAACAAAACATTGATCTTGAAGTAGAAGCTTATGCTGAATATGAATCTGATGTTACAAGCCAAGTTGCTTCCAATGTATCATCAACTCAAGAAACCTCTTGCAACATCACAAATCCTAATTCATATGATATGTCTCTTGATTTAACTCTAAATTTCAAGAACAATGAGATACCAACAACAAGAGATTCTAACTCAATAGGATTCTCACTTTCAAGCAGTACTTCTGAGAGCAGCAATGAAGCTGCAGCAGCAACAATTCCAAGAGTTTTCTCATGCAATTACTGCCAGAGAAAGTTTTTCAGCTCACAAGCTCTTGGTGGACACCAAAATGCACATAAAAGAGAAAGAACATTAGCAAAAAGAGCTATGAGAATGGGAATTTTTTCTGATAGGTATAATGCTAGTTTAGCATCTCTACCTTTGCATGGTTCTTTTAGGTCATTAGGAATAAAAGCACACTCTTCAATGCACTATGGTTTTTCACCAACAACAATTAGGCCTCATCATCATGAGGTGAAAAATAATACGAGATTCAAACAACAAGGATGTGTTGGATTTCCGATATTCTTCGAAGATGAGGAGTCAAAGTTGATGTGGCCTGGTAGTTTTCGACAGGCATCTGAGGCGGGTGATGGTCGACAGAATTTCGTACTCACTGAGGTGAATCCATGTGTAGACAGAGAAAACTCTACACCAGATTTGACATTGAAACTTTGA 720 0.3764 MKQNIDLEVEAYAEYESDVTSQVASNVSSTQETSCNITNPNSYDMSLDLTLNFKNNEIPTTRDSNSIGFSLSSSTSESSNEAAAATIPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGIFSDRYNASLASLPLHGSFRSLGIKAHSSMHYGFSPTTIRPHHHEVKNNTRFKQQGCVGFPIFFEDEESKLMWPGSFRQASEAGDGRQNFVLTEVNPCVDRENSTPDLTLKL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1436 239 PANTHER ZINC FINGER PROTEIN JAGGED 1 239 IPR045320 GO:0003700
Mal8g1436 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Mal8g1436 239 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Mal8g1436 239 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 239 - -
Mal8g1436 239 SUPERFAMILY beta-beta-alpha zinc fingers 89 118 IPR036236 -
Mal8g1436 239 Gene3D Classic Zinc Finger 72 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1436 Mal-Chr8 27447108 27447827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1436 73 239 C2H2 Transcription Factor Family AT1G66140 49.239 1.47e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal8g1436 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1436 - - gmx:100788768 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3133 2 44600612 44601334 Mal8g1436 8 27447108 27447827 PCT