Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1434 ATGCAAACCCTCAAAACCAACCTCAACCCACCTCTTTCACTTGGTTGGTCCGACCCGGATCCATGTAAATGGACCCATGTTTCTTGCTCCGACAACAACCGTGTTACAAGAATCCAAATCGGTCGCCAGAATCTTCATGGTACACTACCACAAACTCTTCAAAACCTTACCAACTTACAACACTTAGAGCTTCAATTCAACAACTTTTCAGGTCCTCTTCCGAGTTTAAATGGTTTAAACTCTCTTCAAGTTTTCATGGCGAGTGGTAACAGTTTTTCATCAATTCCTGGTGATTTTTTTGGTGGTATGTCTCAGCTTGTTTCTGTTGAGATTGATAATAACCCTTTTGAGTCTTGGGAGATTCCTATGTCTTTGAAAGATGCTTCTTCTCTTCAGAATTTTTCTGCTAATAGTGCTAATGTGAAGGGTAAGTTACCTGATTTTTTTAGTGATGATGTTTTTCCTGGTTTGACCCTTTTGCATTTAGCTTTCAATAAACTTGAGGGTGTGTTGCCAAATGGGTTTAATAGTTTGAAGGTTGAATCTTTGTGGTTGAATGGTCAGAAGAGTGATGCTAAGCTTAGTGGGTCAGTTGAGGTTTTGCAGAATATGACTTCTTTGACTGAGGTTTGGTTGCATTCTAATGGGTTTAATGGTCCTTTGCCTAATTTTGGAGGGTTGAAAAATTTGGAAGTTTTGAGTTTAAGGGATAATTCTTTTACTGGTGTTGTTCCTAGTTCTTTGGTTGGACTTAAATCACTTAAAGTTGTGAACTTAACTAATAACTTGTTTCAGGGTCCGGTGCCGGTTTTTGGTGCTGGTGTTGAGGTTGATAATACTAAGGATTCTAATAGCTTTTGTTTGCCTAGTCCTGGTGATTGTGATCCTAGGGTGAATGTTCTTCTTTCGGTTGTTGGGGGTATGGGTTATCCTTTGAGGTTTGCTGAGAGTTGGAAGGGGAATGATCCTTGTGCTGATTGGATTGGGATTACTTGTAGTAATGGGAACATTACTGTTGTTAATTTTCAAAAGATGGGTCTTAGTGGTATGATATCTCCGGATTTTGCGAAGCTTAAATCACTACAAAGACTTATTTTGTCGGATAACAATCTCACTGGTTCGATTCCTAATGAGCTTACTACCTTGCCTATGCTAACTCAATTGAATGTCTCTAACAATCATATCTTTGGGAAAGTACCAAGTTTTAGGAGCAATGTGATTGTGAGTACTAGTGGGAACGTTGATATAGGGAAGGATAAAAGCAGCTTTTCCCCTCAGGGTCCGGCGTCTCCTAATGGTATCAATGCAAGTGGTGGAAATGGTGGGAGTAATGGAAATGGCGGCAAAAAGTCTTCTTCACATGTGGGATTGATTGTGTTTGTTGTGGTTGGGGCTATTTTTGTAGCTTCTTTGATTGGTTTCTTGGTTTTCTGTTTGCTTAGAATGAGGCAAAAGAAGTTAAGCAGGGTGCAGAGTCCAAATGCATTAGTTATTCACCCTCGGCATTCTGGATCAGACAATGATAGTGTGAAGATAACGGTTGCTGGGTCGAGTGTAAGTGTTGGAGGTGTGAGTGAAGCTCACACCGTACCCAACAGTGAGGTGGGAGATATTCAAATGGTTGAATCGGGGAACATGGTTATTTCAATACAGGTTTTGAGGAGCGTCACGAACAATTTCAGCGAGAAAAATATATTGGGACAAGGAGGTTTTGGAACGGTTTACAAAGGTGAACTCCATGATGGTACGAGAATCGCTGTGAAAAGAATGATGTGTGGGGCAATAGTTGGAAAGGGTGCAGCAGAATTTCAGTCTGAAATTGCTGTTTTGACAAAGGTTCGTCACCGGCACCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTTTATGAGTACATGCCTCAGGGGACCCTAAGTAGGTATATTTTTAATTGGCCAGAGGAAGGACTCGAACCACTCGGGTGGAATAAGAGATTGATCATTGCCTTAGATGTTGCGAGGGGTGTTGAGTACCTTCATAGCTTGGCTCATCAAAGCTTCATACACAGAGACCTGAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTAGCAGATTTTGGTCTTGTGCGTCTTGCTCCAGAAGGGAAAGGTTCAATTGAAACAAGAATTGCAGGAACTTTCGGATATTTGGCACCAGAATATGCAGTTACCGGTCGTGTGACAACTAAAGTTGACGTGTTCAGCTTTGGTGTAATATTGATGGAGCTGATAACCGGAAGAAAAGCACTTGATGACAGCCAACCGGAGGATAGCATGCATCTTGTAGCATGGTTCCGAAGAATGTACTTGGATAAGGACTCATTCCGCAAGGCAATTGACCCCACAATTGAAATTAATGAAGAAACTCTTGCTAGTATCCACACTGTAGCAGAGTTAGCTGGTCACTGCAGTGCAAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTTAACGTGCTTTCTTCTCTTGTAGAACAATGGAAGCCATCTGATACGAATTCTGAAGATATATATGGTATCGACCTTGACTTGTCTCTACCACAAGCACTCAAGAAGTGGCAAGCTTACGAAGGTGCAAGTCAATTGGAGTCATCGTCGTCTTCGCTTCTTCCAAGTTTGGATAACACACAGACAAGTATACCTAATCGCCCGTATGGATTTGCCGATTCTTTCACATCAGCAGATGGTAGATGA 2742 0.4183 MQTLKTNLNPPLSLGWSDPDPCKWTHVSCSDNNRVTRIQIGRQNLHGTLPQTLQNLTNLQHLELQFNNFSGPLPSLNGLNSLQVFMASGNSFSSIPGDFFGGMSQLVSVEIDNNPFESWEIPMSLKDASSLQNFSANSANVKGKLPDFFSDDVFPGLTLLHLAFNKLEGVLPNGFNSLKVESLWLNGQKSDAKLSGSVEVLQNMTSLTEVWLHSNGFNGPLPNFGGLKNLEVLSLRDNSFTGVVPSSLVGLKSLKVVNLTNNLFQGPVPVFGAGVEVDNTKDSNSFCLPSPGDCDPRVNVLLSVVGGMGYPLRFAESWKGNDPCADWIGITCSNGNITVVNFQKMGLSGMISPDFAKLKSLQRLILSDNNLTGSIPNELTTLPMLTQLNVSNNHIFGKVPSFRSNVIVSTSGNVDIGKDKSSFSPQGPASPNGINASGGNGGSNGNGGKKSSSHVGLIVFVVVGAIFVASLIGFLVFCLLRMRQKKLSRVQSPNALVIHPRHSGSDNDSVKITVAGSSVSVGGVSEAHTVPNSEVGDIQMVESGNMVISIQVLRSVTNNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMMCGAIVGKGAAEFQSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRYIFNWPEEGLEPLGWNKRLIIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDDSQPEDSMHLVAWFRRMYLDKDSFRKAIDPTIEINEETLASIHTVAELAGHCSAREPYQRPDMGHAVNVLSSLVEQWKPSDTNSEDIYGIDLDLSLPQALKKWQAYEGASQLESSSSSLLPSLDNTQTSIPNRPYGFADSFTSADGR* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1434 913 ProSitePatterns Protein kinases ATP-binding region signature. 566 598 IPR017441 GO:0005524
Mal8g1434 913 MobiDBLite consensus disorder prediction 879 902 - -
Mal8g1434 913 Gene3D Ribonuclease Inhibitor 296 420 IPR032675 -
Mal8g1434 913 MobiDBLite consensus disorder prediction 417 448 - -
Mal8g1434 913 SUPERFAMILY Protein kinase-like (PK-like) 535 844 IPR011009 -
Mal8g1434 913 SMART LRR_typ_2 227 250 IPR003591 -
Mal8g1434 913 SMART LRR_typ_2 79 102 IPR003591 -
Mal8g1434 913 SMART LRR_typ_2 358 382 IPR003591 -
Mal8g1434 913 SMART LRR_typ_2 154 177 IPR003591 -
Mal8g1434 913 SMART LRR_typ_2 56 78 IPR003591 -
Mal8g1434 913 SMART serkin_6 560 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1434 913 Pfam Protein kinase domain 561 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1434 913 Pfam Leucine rich repeat 355 395 IPR001611 GO:0005515
Mal8g1434 913 Pfam Leucine rich repeat 224 263 IPR001611 GO:0005515
Mal8g1434 913 PANTHER OSJNBA0070M12.3 PROTEIN 1 913 - -
Mal8g1434 913 CDD STKc_IRAK 566 839 - -
Mal8g1434 913 PANTHER RECEPTOR PROTEIN KINASE TMK1 1 913 - -
Mal8g1434 913 Pfam Leucine rich repeat N-terminal domain 2 30 IPR013210 -
Mal8g1434 913 Pfam Leucine rich repeat N-terminal domain 299 333 IPR013210 -
Mal8g1434 913 ProSiteProfiles Protein kinase domain profile. 560 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1434 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 685 697 IPR008271 GO:0004672|GO:0006468
Mal8g1434 913 SUPERFAMILY L domain-like 18 402 - -
Mal8g1434 913 Gene3D Transferase(Phosphotransferase) domain 1 638 859 - -
Mal8g1434 913 Gene3D Ribonuclease Inhibitor 1 294 IPR032675 -
Mal8g1434 913 MobiDBLite consensus disorder prediction 879 913 - -
Mal8g1434 913 Gene3D Phosphorylase Kinase; domain 1 521 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1434 Mal-Chr8 27254831 27258042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1434 35 829 Receptor kinase-like Gene Family AT1G55610 29.598 3.02e-83 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mal8g1434 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1434 - K00924 aprc:113846741 1477.23