Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1433 ATGGTTTTATCATGGACAAAAGGTAGTAGAGTTTTCCGTCGTGCAAGAAAAGGAAAAGAGTTATTATCAAATTCATCCAACGATCTACAAGTGGAAATAGCAATTCCAACTCATTTTCGTTGCCCAGTTACACTAGACTTGATGAAAGACCCTGTTACACTTTCCACAGGCATAACCTACGACAGAGACAGCATAGAAAAATGGTTTGAATCAGGAAACAACACATGTCCCGTTACAAAGACAGAGTTAACATCCTTTGACATCGTACCAAATCACTCTCTTCGTAGAATGATTCAAGATTGGTGTGTACAACACCGTTCCTACGGTGTTGAAAGAATCCCAACTCCACGTATTCCAGTAACCCCATACGAGGTTACTGATACGTGTAGCAGGATTCTTTCGGCGGCGCAACAAGGGGATGACAACAAGGTTCTTGAGTTGGTGAAAAAGATAAAGAGTTGGGGAAAAGAGAGTGAGAGGAACAAGAAGGTTATAGTTTCAAATGGTGCTTCTCTTGTTCTTGCTAAGGTTTTTGATTCTTTCTCACGTGGTTTGATTGAGAAGAATGTTATTGTTTTGGAAGAGATTATGGAAGTGCTAACTTGGATGCGTCCTATTCCTGAAGAAGGTAGAATTGTCTTTTTGGGATCTTCAAATTCTTTGAGTTGTTTGGTTTGGTTCTTAAATGATCAACAAAAAATTTCAACTAGGCAAAATGCTTCTTTGTTGATTAAGGAAATGAATGTTGAGTCATTAGTGAAAATTGAAGGGATTGCTGAATCTTTGGTGAACATGGTTAAGGTTAATGTTGAGATTGGGAGTGTTTCCACAAAAGCATGTTTGTCAACAATTTTTCACTTGGTTTACTCATCAAAGAATAGAAAAGTGATTTTGGAGAGGTTTGTTGAATTGGGTTTGGTTTCAATTTTATTGGAGATTCTTGTTGATGCTGAAAAAGGGGTTTGTGAGAAAGCTTTAGGTGTGTTGAGTTGTCTATGTGATAGTCAAAATGGGGTGCAAATAGCAAAGTCAAATGCTTTGACTTTGCCTCTTGTTATTAAGAAGCTTTTGAGGGTTTCTGAATTGAGTTCTAGTTTTGTTGTTTCTATTGTTTACAAGATTTGTGATAAGGCTGAAGAAGGTGTTTTGATTGAGGCAATTCAAGTTGGGATGTTTCAGAAATTACTTGTTTTGTTGCAAGTAGGTTGTGCTGAGAGTACCAAGGAGAAAGCTACTGAATTGTTGAAATTGTTGAATGGTTATAAAAGCAAAGCAGAGTGTGTTGATTCATCATCATTGGATTTCATGCACCTTAAGAAGCCATTCTAA 1329 0.3725 MVLSWTKGSRVFRRARKGKELLSNSSNDLQVEIAIPTHFRCPVTLDLMKDPVTLSTGITYDRDSIEKWFESGNNTCPVTKTELTSFDIVPNHSLRRMIQDWCVQHRSYGVERIPTPRIPVTPYEVTDTCSRILSAAQQGDDNKVLELVKKIKSWGKESERNKKVIVSNGASLVLAKVFDSFSRGLIEKNVIVLEEIMEVLTWMRPIPEEGRIVFLGSSNSLSCLVWFLNDQQKISTRQNASLLIKEMNVESLVKIEGIAESLVNMVKVNVEIGSVSTKACLSTIFHLVYSSKNRKVILERFVELGLVSILLEILVDAEKGVCEKALGVLSCLCDSQNGVQIAKSNALTLPLVIKKLLRVSELSSSFVVSIVYKICDKAEEGVLIEAIQVGMFQKLLVLLQVGCAESTKEKATELLKLLNGYKSKAECVDSSSLDFMHLKKPF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1433 442 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 9 442 - -
Mal8g1433 442 Gene3D - 128 430 IPR011989 -
Mal8g1433 442 SUPERFAMILY RING/U-box 30 111 - -
Mal8g1433 442 ProSiteProfiles U-box domain profile. 34 108 IPR003613 GO:0004842|GO:0016567
Mal8g1433 442 SUPERFAMILY ARM repeat 129 420 IPR016024 -
Mal8g1433 442 CDD RING-Ubox_PUB 39 80 IPR045210 -
Mal8g1433 442 Pfam U-box domain 35 106 IPR003613 GO:0004842|GO:0016567
Mal8g1433 442 SMART Ubox_2 38 101 IPR003613 GO:0004842|GO:0016567
Mal8g1433 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 112 IPR013083 -
Mal8g1433 442 PANTHER WDSAM1 PROTEIN 9 442 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1433 Mal-Chr8 27190805 27192133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1433 10 442 U-box Gene Family AT5G37490 44.091 2.74e-114 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1433 - - gmx:100795913 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3135 2 44652532 44653836 Mal8g1433 8 27190805 27192133 PCT