Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1428 ATGAGCTCTTCTTCGTCCACGAAAATGAATGAGGATGTGCCAAGGTGGCTTCAGGATTTTTTGGAGAAAAAGTTTTTTGACCCATGTCCTGCTCATTCGGATCGAAGGAATGAGTTGACTTTGTACTGTATAAATTGCAAAGAATCTGCTTGTCAGCATGGTGTATCATCAGGATTTCATCAAGGTCACCAGATACTGAAAGTGTACAGATATATGTACAAGGATGTTGTCCGCATGACTGCTATGCAGGCATATATCAACTGCTCCCAAATCCAGCATTTCAAATGCAACAACCGGCTGGTTCTGCATCGTCTCCCACTCTGTGGATCAGCATTGGATGACGCATCAGCATGCAGCTTTGACAGCAAAAAGCCAAATGGAGCTAATTCATATCAGTACTGCTCCATTGCTTGCAAGGCCAAAGCTTTGTCAAGAAAAGCTGAATCTGAAGATTCATTTCCTCCTCAGGAATCACGTGAGGAAGCTTCTGAGTCGTCCAAGAGAAAAAGGAAGCGAAAAGGAACACCACACAGAGCTCTTCTCTTCTGA 549 0.4372 MSSSSSTKMNEDVPRWLQDFLEKKFFDPCPAHSDRRNELTLYCINCKESACQHGVSSGFHQGHQILKVYRYMYKDVVRMTAMQAYINCSQIQHFKCNNRLVLHRLPLCGSALDDASACSFDSKKPNGANSYQYCSIACKAKALSRKAESEDSFPPQESREEASESSKRKRKRKGTPHRALLF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1428 182 SUPERFAMILY B-box zinc-binding domain 28 70 - -
Mal8g1428 182 MobiDBLite consensus disorder prediction 147 182 - -
Mal8g1428 182 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 182 - -
Mal8g1428 182 CDD Bbox2 29 68 - -
Mal8g1428 182 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 5 182 - -
Mal8g1428 182 Pfam PLATZ transcription factor 70 139 IPR006734 -
Mal8g1428 182 Gene3D Classic Zinc Finger 21 86 - -
Mal8g1428 182 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1428 Mal-Chr8 27014587 27016615 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal8g1428 PLATZ 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1428 - - mtr:MTR_5g077740 252.677