Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1427 ATGGAAGCTTCACATGAAACAGAGAGAAACGATCAAAGTTTCAATCTTTTCCAAAAACAATACCAACCCACAATTTCATTCTCCATCGATGCTTGCAAGAAGCGAAAACGATGGCCGAAGATTTTCCGGCTACAATCTTTCGCTGATCCTGGTTGTCCAATCGCAACTTCAGGTCCTTTCCGTGAAAACGTTCGGTTCTTTCTTCAAGAAGCTGGTGAGCTTGAAGATTATACGGTTATGGGGAATCCTCTTTGGTGCACTTTTTTGATTCATGAAAAGACGAATTTGATGGCTCCATTTTACACTATTGAAGAAGAAGTTTATAACTCTTCTCATCCTTTCTGTGATCACTGTCGCTGTGTAGGTTGGAGTGGACATTTTGTATCAAAGAGAAGGTACCATTTTATAATCCCAATGGATAATGGGTGGCATAAACCCTTAGATGAAGAAGCTCTTGATAATCAGAGTCATCTATTACATGGTGTGATTCATTGCAATGGTTATGGCCATTTGGTATGTCTTAATGGCATTGAAGGTGGTTCCAAATTTCTTAGTGGGAGAGAAATCATGGATCTATGGGACAGAATTTGCACCAATCTTAGAGCAAGGCAAATTGCAGTTGAAGATGCTTCAAGGAAAAGGTCAATGGATCTTCGCTTACTTCACGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGGGTTATGGTTTTTGCCGTGGAAGCTTTGGTGTGACAGAACAAAACTATGATGATGCTATTGAAACTCTTGGCTCATTAGTTCTTGATGATATTGTAAGAGATCTGAGTAAGACAAAGTACCACAAAGATTTCAAACAAATGATTCGTTTCTATAGAGATATGAGTGAAACTCATATCATCACACTAAGGGAGCTTCTAAGATTCATGCTCACTGTCAAGTCTCGTCGACCAGTGTCAAAAATGACAGTCACTTGTTCTTCTTCTAATGCTGCTTCTGCTACTGATTCAACTTCTTGTTCTACTTCAGCATTTATGTCAAGAAATTCAACCAAACATGCACTTTCAAGTAGTAGATCAAATTTCACCATGAAGGAAAAATCAGCTAAATATAAGAAGTTCAGCACTGCAGTAGCTAATATGGATAGTAGGTGGCCAACAAGGAGACTAGAGTTTGCAGCTCAAGTGATTGTGGAAGCATTAAAAGAGGACAAAGCTATGAAACCAGGCTCTAGTGGAATGACAAGACAAGATGTGAGGGATGCAGCTAGGCTTCACATTGGTGATACTGGTTTACTTGATTATGTGCTGAAATCACTTAACAATGTGATTGTTGGAAACTATGTGGTTCGCCGCATGGTTAACTCTTCATCAAGGATCCTTGAATATACAATTCAAGAGTTCGGAAACGGGTTTAAAGAACCTGAAATGGAACATGGTGTAGTGACAATTGCAGATATTCCTAAAGTCGAGTCACCAACATCATCATCGTCATCATCTTTGGGGCCTAGTAATGATGTTTACAGTGATGTAGTTTATCTTTACAAGAATGTGTTGTTGGGTTATCCAGATTCAGAGGCAGTGGAATTAGCAGTTCAAACAATTCTTGACTGTAGACACTTTGTGAAGAAGTGGAAATTGAGAGATGAAATGGAACAAGCGTTGACATTTATCTGCCGTTTGAAACCGAATTTCGTTGAGAATAAGTCTGATTTAAAAGGGCCCTCTTGTGGTGAGATTGTAACTGTTCCACTGCATGCAACAGTCAAAGACCTGAAGCAAGCTGCTGAAGCTGCATTAAGGGACACATACTGCATAGCTGAAAGACTCATAGTGACAGATATCAAAGAATTGATGGATGTGGAAGATGAAGAAGTGATTTTTGGACAGATTGAATCTGGTGTGAAGCTTTGTGTAAGGGGAATTGGTATTGATTTGTATACTCCATTGAAATATCAAGGAGGAAGTGATAATTGGAAAGTGAGGTGTGAGTGTGGAGCACAAGATGATGATGGTGAGAGAATGGTGTCTTGTGATATTTGTGAAGTGTGGCAGCATACAAGATGTTGTGGAATAGATGATTCTGAGACAGTTCCACCTTTGTTTGTTTGTTCTGGATGCTGTGATTCACTTGTGCCACCAAGGATTGAATCTAGCAGCTATGGTATCGTGGACTGTGCTGATTCTTTTCTGGTTTCACCTGAGCCTACTCATTTGTTTGAGTATGCTTATGGATATTGA 2220 0.3968 MEASHETERNDQSFNLFQKQYQPTISFSIDACKKRKRWPKIFRLQSFADPGCPIATSGPFRENVRFFLQEAGELEDYTVMGNPLWCTFLIHEKTNLMAPFYTIEEEVYNSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDNGWHKPLDEEALDNQSHLLHGVIHCNGYGHLVCLNGIEGGSKFLSGREIMDLWDRICTNLRARQIAVEDASRKRSMDLRLLHGVAYGHSWFGRWGYGFCRGSFGVTEQNYDDAIETLGSLVLDDIVRDLSKTKYHKDFKQMIRFYRDMSETHIITLRELLRFMLTVKSRRPVSKMTVTCSSSNAASATDSTSCSTSAFMSRNSTKHALSSSRSNFTMKEKSAKYKKFSTAVANMDSRWPTRRLEFAAQVIVEALKEDKAMKPGSSGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNSSSRILEYTIQEFGNGFKEPEMEHGVVTIADIPKVESPTSSSSSSLGPSNDVYSDVVYLYKNVLLGYPDSEAVELAVQTILDCRHFVKKWKLRDEMEQALTFICRLKPNFVENKSDLKGPSCGEIVTVPLHATVKDLKQAAEAALRDTYCIAERLIVTDIKELMDVEDEEVIFGQIESGVKLCVRGIGIDLYTPLKYQGGSDNWKVRCECGAQDDDGERMVSCDICEVWQHTRCCGIDDSETVPPLFVCSGCCDSLVPPRIESSSYGIVDCADSFLVSPEPTHLFEYAYGY* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1427 739 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 33 707 - -
Mal8g1427 739 SMART PHD_3 655 701 IPR001965 -
Mal8g1427 739 SUPERFAMILY FYVE/PHD zinc finger 648 707 IPR011011 -
Mal8g1427 739 CDD PHD_MMD1_like 656 700 - -
Mal8g1427 739 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 33 707 - -
Mal8g1427 739 ProSitePatterns Zinc finger PHD-type signature. 656 700 IPR019786 -
Mal8g1427 739 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 643 704 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1427 Mal-Chr8 27010336 27013303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1427 15 706 PHD Transcription Factor Family AT5G22260 32.838 4.96e-122 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1427 - - mtr:MTR_5g077750 1328.15