Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1426 ATGATGCATAGGTACGGGTACGATACCAGATTATTGAAAAAATCAATGGTAGAAGATAAGGTGATGAAGGAAGAGGAAGAGAAAAACATGGATAAACAAATGGCGTCGTGTTCGAGATCTTCTTCACCTTTAGCTTCTTCAGATGAAAGAGATTACGAAGTGCAGGATCTTCGAGATAAATTGAAATCATCAAGAGGAAGCAGGTTTAATTTGATAGAGAAAGAGTTAGGGTTAAAGATTGGTTGGAGAAAGTTCAGTCGTCAAACTCTTCTTCATGATTTTGTTATAAATCCTCATAACAGGTGGTATCGAGCATGGATCAAATTCATATTGTTATGGGCAGTATACTCATCTTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGCCTGCCGGAGAATCTCTTTATACTGGACATTGTAGGACAAATAGCTTTCCTTGTGGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAGACCTATCGCATGGTCTCCAACCGTACTCCTATTGCTCTGCGGTATCTAAAATCTAGCTTTGTCATTGATCTTCTTGGATGTATGCCCTGGGACCTCATCTACAAGGCTTGTGGACGGAGAGAGGAAGTGAGGTACCTATTGTGGATCAGATTATATAGGGCACAGAGAGTCGTGCAATTTTTCAGGAATTTGGAGAAAGACATACGTGTCAATTACATTATTGCTCGGATTGTGAAACTTATAGTTGTTGAACTCTACTGCACCCACACAGCGGCCTGCATTTTCTATTATTTGGCTACTACACTACCTGAATCCCAAGAGGGTTACACGTGGATAGGAAGTTTGAAACTGGGTGACTATAGTTATTCAAAGTTCAGAGAAATTGATATTTGGAAGCGCTACACGACATCGTTGTATTTTGCTATTGTTACGATGGCTACTGTCGGCTATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATTTATGTTTCATTTGACATGGTTCTTGGTGCTTACTTGATCGGTAACATGACAGCCTTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAGGATGGCTGATCTGATGAAATATATGAATAGAAATGAACTTCATAGGGATATCCGTGACCAAATAAAGGGTCATGTGCGCTTGCAGTTTGAAAGCAGCTACACCGACGCTGCTGTCCTTCAGGACATTCCCATTTCTATTCGATCTAAGATATCCCAATCATTGTATTTGCCATACGTTCAAAAAGTTGCTCTTTTTAGAGGATGCTCTTCAGAATTCATCAATCAGATTGTTACTAGGCTCCATGAGGAATTCTTTCTTCCTGGGGAAGTTATAATGCAACAAGGATACGTTGTAGATCAACTATATTTTGTCTGTGATGGTATGCTGGAGGAAGTAGGCACAGCTGATGATGGGTCCGAGGAAACTGTTGCACTTCTAGAGCGCAACAGCTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCACATACTGTTCGTGTTTGTGAACTGTGTAGGGTCCTACGGATTGATAAACAATCATTTTCAAATATCCTAGATATATACTTTTATGATGGGAAGAAAGTATTAGACAACCTTCTAGAGGGGAAAGAGTCTATTAGAGGTAAGCAATTGGAGTCAGACATCACATTTCATATTGGAAAGCTAGAATCTGAACTTGCTTTGAAGGTCAATAGAACAGCTTTTGATGGCGATATGTATCAGCTAAAAAGTTTGATTCGAGCTGGAGCTGATCCCAAGAAGACAGATTATGATGGAAGATCACCTTTGCATCTTGCTGCATGCAGAGGATATGAAGATATCACCCTTCTCCTTATTCATGAAGGTGTAGACATCAACGTCAAAGATAACTTTGGGAACACACCGCTACTTGAAGCAGTTAAGAATGGACACGATCGGATTGCTTCTTTACTTGTTAGAGAAGGGGCCTCTTTGAAGATAGATGATGGTGGTAGTTTTTTATGCACAGCAGTTGCAAGAGGAGATTCAGATTATCTTAAAAGGCTTTTATCTAATGGAATGGATGCTAACTTGAAAGATTATGACTATCGAACCCCTCTACATGTTGCTGCATCTGAAGGTTTAATCTTCATGGCAAAGTTGCTATTAGAAGCCGGAGCTAGTGTTTTTACTAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCTCGGATGAGTGGAAATAAGAATCTGATAAAGCTACTGGAAGATGCAAAATCTGCTCAATTGACAGAATACCCTTTTCCCCAAGAAATCACAGATAAAGTACATCCAAAGAAGTGTACGGTATTCCCTTTCCACCCATGGGATCCAAAAGAGCAAAGAAGAAATGGAATAGTATTATGGGTTCCACACACCATTCAAGAGCTAATCAAAACAGCGGCAGAACAGATAGGATTATCTAGTGACTCTTGTATTTTATCAGAAGATGCTGGTAAAATTATTGATGTTAGCATGATTAAGGATGAACAGAAGCTATATTTAGTCAATGAAACACATTAG 2547 0.3946 MMHRYGYDTRLLKKSMVEDKVMKEEEEKNMDKQMASCSRSSSPLASSDERDYEVQDLRDKLKSSRGSRFNLIEKELGLKIGWRKFSRQTLLHDFVINPHNRWYRAWIKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIAFLVDIVLQFFVAYRDSQTYRMVSNRTPIALRYLKSSFVIDLLGCMPWDLIYKACGRREEVRYLLWIRLYRAQRVVQFFRNLEKDIRVNYIIARIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDYSYSKFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMADLMKYMNRNELHRDIRDQIKGHVRLQFESSYTDAAVLQDIPISIRSKISQSLYLPYVQKVALFRGCSSEFINQIVTRLHEEFFLPGEVIMQQGYVVDQLYFVCDGMLEEVGTADDGSEETVALLERNSSFGEISILCNIPQPHTVRVCELCRVLRIDKQSFSNILDIYFYDGKKVLDNLLEGKESIRGKQLESDITFHIGKLESELALKVNRTAFDGDMYQLKSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHEGVDINVKDNFGNTPLLEAVKNGHDRIASLLVREGASLKIDDGGSFLCTAVARGDSDYLKRLLSNGMDANLKDYDYRTPLHVAASEGLIFMAKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTEYPFPQEITDKVHPKKCTVFPFHPWDPKEQRRNGIVLWVPHTIQELIKTAAEQIGLSSDSCILSEDAGKIIDVSMIKDEQKLYLVNETH* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1426 848 Gene3D - 567 663 IPR036770 -
Mal8g1426 848 PRINTS Ankyrin repeat signature 713 727 IPR002110 GO:0005515
Mal8g1426 848 PRINTS Ankyrin repeat signature 601 616 IPR002110 GO:0005515
Mal8g1426 848 SUPERFAMILY Ankyrin repeat 576 752 IPR036770 -
Mal8g1426 848 SMART ANK_2a 697 726 IPR002110 GO:0005515
Mal8g1426 848 SMART ANK_2a 633 662 IPR002110 GO:0005515
Mal8g1426 848 SMART ANK_2a 664 693 IPR002110 GO:0005515
Mal8g1426 848 SMART ANK_2a 730 760 IPR002110 GO:0005515
Mal8g1426 848 SMART ANK_2a 600 629 IPR002110 GO:0005515
Mal8g1426 848 ProSiteProfiles Ankyrin repeat region circular profile. 600 632 - -
Mal8g1426 848 PANTHER POTASSIUM CHANNEL SKOR-LIKE 47 847 - -
Mal8g1426 848 SUPERFAMILY cAMP-binding domain-like 352 541 IPR018490 -
Mal8g1426 848 ProSiteProfiles Ankyrin repeat profile. 697 729 IPR002110 GO:0005515
Mal8g1426 848 ProSiteProfiles KHA domain profile. 775 848 IPR021789 -
Mal8g1426 848 SUPERFAMILY Voltage-gated potassium channels 98 349 - -
Mal8g1426 848 SMART cnmp_10 424 542 IPR000595 -
Mal8g1426 848 Gene3D - 106 350 - -
Mal8g1426 848 ProSiteProfiles Ankyrin repeat region circular profile. 697 729 - -
Mal8g1426 848 ProSiteProfiles cAMP/cGMP binding motif profile. 424 527 IPR000595 -
Mal8g1426 848 Gene3D Jelly Rolls 395 556 IPR014710 -
Mal8g1426 848 MobiDBLite consensus disorder prediction 34 48 - -
Mal8g1426 848 PANTHER POTASSIUM CHANNEL AKT1 47 847 IPR045319 GO:0005249|GO:0006813
Mal8g1426 848 Pfam Cyclic nucleotide-binding domain 444 528 IPR000595 -
Mal8g1426 848 ProSiteProfiles Ankyrin repeat profile. 664 696 IPR002110 GO:0005515
Mal8g1426 848 PRINTS EAG/ELK/ERG potassium channel family signature 248 258 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal8g1426 848 PRINTS EAG/ELK/ERG potassium channel family signature 340 349 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal8g1426 848 PRINTS EAG/ELK/ERG potassium channel family signature 296 313 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal8g1426 848 PRINTS EAG/ELK/ERG potassium channel family signature 139 149 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal8g1426 848 Pfam KHA, dimerisation domain of potassium ion channel 774 843 IPR021789 -
Mal8g1426 848 ProSiteProfiles Ankyrin repeat region circular profile. 633 664 - -
Mal8g1426 848 Pfam Ankyrin repeats (3 copies) 670 751 IPR002110 GO:0005515
Mal8g1426 848 Pfam Ankyrin repeats (3 copies) 582 663 IPR002110 GO:0005515
Mal8g1426 848 MobiDBLite consensus disorder prediction 22 50 - -
Mal8g1426 848 Gene3D - 664 760 IPR036770 -
Mal8g1426 848 ProSiteProfiles Ankyrin repeat profile. 600 632 IPR002110 GO:0005515
Mal8g1426 848 ProSiteProfiles Ankyrin repeat region circular profile. 664 695 - -
Mal8g1426 848 CDD CAP_ED 424 530 IPR000595 -
Mal8g1426 848 Pfam Ion transport protein 104 349 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal8g1426 848 ProSiteProfiles Ankyrin repeat profile. 633 665 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1426 Mal-Chr8 26991596 27006610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1426 671 750 Ion Channels AT5G37500 33.333 2.55e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1426 K21867 - gmx:100814385 1404.81