Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1414 ATGATCAACGAGCCGTTCAAAATCAGAAAGGAAAGAAAGGAAAGAAAAAAATGGGGCTCAACCAAGGATCTTTTCGTTAGCGTTGCTCAGGAATACACTAACAATTTTAATAACGAAAACGTATTGGGGCAAGGAGGTCCAATCAAGAACATAAAAAATAAACTAAGCCCAAAGCCATCCGTTGGTCTTGAACATGCATGTAACACCGACGAAGCTAGTTCTAGTGATGTACCACCTTCACATCACATTGGTGAAGCAAGTTCGGGTGTTGTACCACCTGCGCGTCACATCGGTGAAGCAAGTTTGAGTTGCTATGGCTTAGCTCAACCAAGGATCTTTACGTTAGTGTTGCTAAGAAGATACACTAACAGTTTTAATGATGAAAACGTATTGGGGCAAGGAGGTTTGGCAGCTTTTTATAGAGGAAAATTTGTTGGTGGTGGCTATTTTGCAATAAAAAAAGTGCAGAGGGAAGCAACTGGATCAGAATTTGACTCAGTACTTCAGGAATTCAATAAAGTTTTTGTTATAAACCCTATAGTTTGTCCGAATTTCGTGATTCAAGAAGTCCAATACTTGTTGGTTCCATTTTCTGTTGTCAAAATGAGTTCAAGTGGCTCTGGCTATACTCAACGCCATGTCTTTCGGTTATCGATGCTCAATGAATACACTCAAAGTTTTAGATGCGAAAATATTATTGGACAAGGAGGCTCTACAACTATTTGTAAAGCCACTTTTACTATTGGTTCTTGCATTAACTGTTTCGTAGTAAAAAAAGTGCATCCGCGAGTACCTAACTCACTATTTGAGTCAGAACTTGATACTTTAGCAAAAACCCGTCATCAGAATCTGGTTTCTATTCTTGGTTCCTGCACAGAAGAGGGAGAGAGAATTATGATGCTTGAGTACATGTCTGGGGGGACTCTTAGTACGCGTCTTTTTGATTGGGAGGCCGAAACACTCCAACCACTCACGTGGGCTGAAGGCACTGTGACACCTCTAGGTGACGTGTACAACTTTGGTGTTATACTGATGGAACTTATAACTGCAAGGAAAGCAGTTAATGATAGCCAGGCCGAGGAATCCCAACATATTGTAGCATGGGACCCAAAGGGAAGGCCTGAAATGGATTATGTGGCTAGAGAACTTGGTACTCTTGTAAAACAACCGAGACCAGTTCGTTTCAATGTTGATGAAAACATTCATTTTGATGGGATTCAACCTGGAGTGAGTTTGCGAGAGCAATTAAATCAGTGGAAGAAAATAGGGGCAATCCTTCATCCAAACAGGAAAACTACAAGGTGCTTTTGGATATTTGCCACCAAAATACGCAGGTTGGTTCCATTTTCTGTTGTCAAAATGAGTTCAAGTGGCTCTGGCTCTACTCAACGTCATGTCTTTCAGTTATGGATGCTCAAGGAATACACTCAAAGTTTTAGTCGCGAAAAGATTATTGGACATGGAGGCTCTGCAACTGTTTATAAAGCCACTTTTACTACTGGTTATTGCACTAACTGTTTCGTAGTAAAAAAAAAGTGCATCTGCGAGTACCTAAATCACTATTTGAATCGGAACTTGATACTTTAG 1587 0.4045 MINEPFKIRKERKERKKWGSTKDLFVSVAQEYTNNFNNENVLGQGGPIKNIKNKLSPKPSVGLEHACNTDEASSSDVPPSHHIGEASSGVVPPARHIGEASLSCYGLAQPRIFTLVLLRRYTNSFNDENVLGQGGLAAFYRGKFVGGGYFAIKKVQREATGSEFDSVLQEFNKVFVINPIVCPNFVIQEVQYLLVPFSVVKMSSSGSGYTQRHVFRLSMLNEYTQSFRCENIIGQGGSTTICKATFTIGSCINCFVVKKVHPRVPNSLFESELDTLAKTRHQNLVSILGSCTEEGERIMMLEYMSGGTLSTRLFDWEAETLQPLTWAEGTVTPLGDVYNFGVILMELITARKAVNDSQAEESQHIVAWDPKGRPEMDYVARELGTLVKQPRPVRFNVDENIHFDGIQPGVSLREQLNQWKKIGAILHPNRKTTRCFWIFATKIRRLVPFSVVKMSSSGSGSTQRHVFQLWMLKEYTQSFSREKIIGHGGSATVYKATFTTGYCTNCFVVKKKCICEYLNHYLNRNLIL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1414 528 Pfam Protein tyrosine and serine/threonine kinase 230 316 IPR001245 GO:0004672|GO:0006468
Mal8g1414 528 SUPERFAMILY Protein kinase-like (PK-like) 219 388 IPR011009 -
Mal8g1414 528 Gene3D Phosphorylase Kinase; domain 1 198 303 - -
Mal8g1414 528 Gene3D Phosphorylase Kinase; domain 1 448 520 - -
Mal8g1414 528 MobiDBLite consensus disorder prediction 59 90 - -
Mal8g1414 528 SUPERFAMILY Protein kinase-like (PK-like) 103 173 IPR011009 -
Mal8g1414 528 ProSitePatterns Protein kinases ATP-binding region signature. 485 511 IPR017441 GO:0005524
Mal8g1414 528 PANTHER OSJNBA0070M12.3 PROTEIN 116 171 - -
Mal8g1414 528 PANTHER OSJNBA0070M12.3 PROTEIN 328 370 - -
Mal8g1414 528 PANTHER OSJNBA0070M12.3 PROTEIN 213 327 - -
Mal8g1414 528 Gene3D Phosphorylase Kinase; domain 1 99 186 - -
Mal8g1414 528 SUPERFAMILY Protein kinase-like (PK-like) 459 518 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1414 Mal-Chr8 26871357 26875648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1414 215 328 Receptor kinase-like Gene Family AT2G21480 35.345 3.44e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mal8g1414 PK_Tyr_Ser-Thr 8.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1414 - K00924 han:110939690 87.8113