Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1409 ATGAACCTGAAAAAAACCGTTCTGCTTTATTTCACAGCATGCTTAATCACAATTCTTTCCGGCGCCGATCTAGCTTCCGACAGAGCCAGTCTACTGACACTCCGCGCCGCCGTGGGTGGACGGACTCTTCTATGGAACTCAACGGAGACAAACCCGTGTTTGTGGACCGGAGTTATCTGCAATAACAAAAGAGTCACAGCTTTAAGATTACCGGCGATGGGTCTCTCCGGTGGCCTTCCGTTAGGTTTAGGTAATCTTACTGAGCTGCAGACACTTTCGCTCCGGTACAACGCGTTAACCGGAGCAATTCCTTTGGATTTTGCAAAACTGGTTTCACTTAGAAATCTTTATCTTCATAGTAACTTTTTCTCCGGTGAGGTTCCCGAGTTTTTGTATGGTTTGCAGAATTTGGTGAGGTTGAATTTAGGTAAAAATAATTTCAGCGGTGAAATTTCTGAACATTTCAATAACCTCACTCGTTTGGATACATTGTTTTTGGAACAGAATTTGTTTACTGGTTCTGTTCCTGACCTTAGTGTTCCACCTTTGCATCAATTCAATGTTTCGTTTAATAATTTAACCGGGGAAATTCCGAAGAGGTTTTCGCGTTTAGATATAAGCGCGTTTTCTGGTAATTCGCTTTGTGGGAATCCACTTCAAGTAACTTGTCCTGGAAACAATGACAAAAATGGTTTATCTGGTGGAGCTATTGCTGGTATTGTGATTGGTTGTGTTTTAGGTTTGGTTTTGATTCTGGTTCTTTTGGTGTTGTTGTGTAGAAAAAGAAGAAAAAGTGATTCTGATAATGTTGCACGTGCCAAGAGTGTTGAGGGTGATGTGTCACGTGAGAAAACAAGTAGAGATGTTGATAGTGGTGGTGGCGGAGGTGTTGGTGGTGGGAGTTATTCAGGTATGGCTTCGGCTTCAACGACGGCTTCTGCTTCGGTTTCAGCTTCGGGTGTGTCATTAGAGAAGAAGAGTTTGATATTTATTGGGAATGTGACTAGAAAGTTTAGTTTGGATGATTTATTAAGAGCTTCTGCTGAAGTTTTGGGAAAAGGGACATTTGGAACAACATACAAGGCAACATTGGAGATGGGAATGAGTGTAGCAGTGAAGAGGTTGAAGGATGTTACAGCAAGTGAAAGAGAATTCAGGGAGAAAATTGAAGAAGTTGGAAAATTGGTTCATGAGAAATTGGTCCCACTTAGGGGTTATTATTTTAGTAAAGATGAAAAGCTTGTTGTGTATGATTATATGCCAATGGGAAGCTTATCTGCACTCTTGCATGCAAATAATGGAGCTGGAAGGACTCCACTGAATTGGGAAACTAGGTCAACCATTGCCCTTGGTGCTGCTCAAGGGATTGCATACCTACACTCACAAGGTCCAACATCTTCCCATGGAAACATCAAGTCATCAAACATCCTTCTCACCAAATCATTCGAACCTCGCGTCTCGGATTTCGGCCTCGCTTACCTGGCTCTTCCAACTGCTACACCCAACCGAGTTTCCGGTTACCGTGCACCAGAGGTAACCGACGCGCGCAAAGTATCCCAAAAAGCAGACGTCTATAGCTTTGGTATAATGCTTTTGGAGCTTCTTACCGGGAAGGCGCCTACTCATTCTTCGCTGAATGAAGAAGGAGTAGACCTACCAAGATGGGTCCAATCCATCGTCCAAGACGAGTGGAACACTGATGTTTTCGACATGGAGCTTCTTAGGTACCAAAATGTTGAGGAGGAAATGGTGAACCTATTGCAGCTTGCTCTTGAATGTACTGCTCAATATCCTGACAAGAGACCTTCAATGGATGTGGTTGCAAGCAAGATTGCGGAAATTTGTCGTCCTAGTTTAGAGAAAGAGGAAGATAAGATTCATGATGATTTGTCTAAAGATGAAGATAATTGA 1911 0.4286 MNLKKTVLLYFTACLITILSGADLASDRASLLTLRAAVGGRTLLWNSTETNPCLWTGVICNNKRVTALRLPAMGLSGGLPLGLGNLTELQTLSLRYNALTGAIPLDFAKLVSLRNLYLHSNFFSGEVPEFLYGLQNLVRLNLGKNNFSGEISEHFNNLTRLDTLFLEQNLFTGSVPDLSVPPLHQFNVSFNNLTGEIPKRFSRLDISAFSGNSLCGNPLQVTCPGNNDKNGLSGGAIAGIVIGCVLGLVLILVLLVLLCRKRRKSDSDNVARAKSVEGDVSREKTSRDVDSGGGGGVGGGSYSGMASASTTASASVSASGVSLEKKSLIFIGNVTRKFSLDDLLRASAEVLGKGTFGTTYKATLEMGMSVAVKRLKDVTASEREFREKIEEVGKLVHEKLVPLRGYYFSKDEKLVVYDYMPMGSLSALLHANNGAGRTPLNWETRSTIALGAAQGIAYLHSQGPTSSHGNIKSSNILLTKSFEPRVSDFGLAYLALPTATPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSIVQDEWNTDVFDMELLRYQNVEEEMVNLLQLALECTAQYPDKRPSMDVVASKIAEICRPSLEKEEDKIHDDLSKDEDN* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1409 636 MobiDBLite consensus disorder prediction 270 296 - -
Mal8g1409 636 PANTHER OS05G0588300 PROTEIN 4 621 - -
Mal8g1409 636 Gene3D Ribonuclease Inhibitor 180 226 IPR032675 -
Mal8g1409 636 Pfam Protein kinase domain 348 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1409 636 CDD STKc_IRAK 351 614 - -
Mal8g1409 636 SUPERFAMILY L domain-like 45 207 - -
Mal8g1409 636 MobiDBLite consensus disorder prediction 270 289 - -
Mal8g1409 636 PANTHER INACTIVE RECEPTOR KINASE-RELATED 4 621 - -
Mal8g1409 636 Gene3D Phosphorylase Kinase; domain 1 307 419 - -
Mal8g1409 636 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Mal8g1409 636 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Mal8g1409 636 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Mal8g1409 636 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Mal8g1409 636 ProSiteProfiles Protein kinase domain profile. 345 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1409 636 SUPERFAMILY Protein kinase-like (PK-like) 349 608 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1409 Mal-Chr8 26799874 26803121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1409 23 617 Receptor kinase-like Gene Family AT1G48480 56.090 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal8g1409 Pkinase 5.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1409 - - aprc:113846223 856.67