Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1405 ATGGGAAGGCAACCTTGTTGTGACAAAGTAGGATTGAAAAAAGGACCATGGACTGCAGAGGAAGACAGGAAGCTCATCAATTTCATCCTTACTAATGGTCAATGTTGCTGGAGAGCTGTCCCTAAATTGGCAGGGCTATTAAGGTGTGGAAAAAGTTGTAGACTTAGATGGACAAATTATTTGAGGCCAGATTTAAAGAGAGGACTTTTATCAGAATATGAAGAGAAAATGGTGATTGATCTTCATGCTCAACTTGGGAACAGATGGTCTAAGATTGCATCTCACCTACCAGGAAGAACAGATAATGAGATAAAAAATCATTGGAATACTCACATAAAGAAAAAGCTCAAGAAAATGGGAATTGATCCCATCACACACAAACCACTAGTACTCTCTAATGCAACTGATCAAACACAAGATCAACCTAAACAACAACAACTACACCAACCAATAGAAAATGAACAGCAAAACCAACAACCTTTGACAATTGACATTGACAACAAAATTGAATCAAAAATTGAGGAGCATAATAAGGAGGTTGAGAAGCCAGATACTTCTTTTGAGTCATCAACCATCATTGAAGTCAAACAGAAAAATGAAATTACTATAACACCCTTATTTGACACAATGGAGCTAATGGATGGATTTTGTATAGATGAAGTTCCTATGATAGAACCTAATGAGATTATAGTGGCCAATTCCTCTTCATCCACCTCTTCATCATCTTCATCAAATTCAACAAATTTCCTTGAAGATCTTCATCTCCCTGATTTTGAATGGTCTAATAATAATAGTGAAGAGAACAATAACAACAATATGGCCTTTTGGGATGATGACTTTATTAGTAGCTTGAATATGCTGATTAATGATGATACTGTTAATAATGGTGAAAGCAAGCAAGCATTTGATGAGATGGTCATTGATTCAGAATCTTGGGCATATGGATTGTTTTGA 954 0.3585 MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPITHKPLVLSNATDQTQDQPKQQQLHQPIENEQQNQQPLTIDIDNKIESKIEEHNKEVEKPDTSFESSTIIEVKQKNEITITPLFDTMELMDGFCIDEVPMIEPNEIIVANSSSSTSSSSSSNSTNFLEDLHLPDFEWSNNNSEENNNNNMAFWDDDFISSLNMLINDDTVNNGESKQAFDEMVIDSESWAYGLF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1405 317 MobiDBLite consensus disorder prediction 134 161 - -
Mal8g1405 317 Gene3D - 70 161 - -
Mal8g1405 317 CDD SANT 16 61 IPR001005 -
Mal8g1405 317 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 275 - -
Mal8g1405 317 PANTHER MYB TRANSCRIPTION FACTOR 1 275 - -
Mal8g1405 317 SMART sant 13 63 IPR001005 -
Mal8g1405 317 SMART sant 66 114 IPR001005 -
Mal8g1405 317 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mal8g1405 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal8g1405 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal8g1405 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal8g1405 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal8g1405 317 CDD SANT 74 112 IPR001005 -
Mal8g1405 317 Gene3D - 11 67 - -
Mal8g1405 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal8g1405 317 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1405 Mal-Chr8 26760160 26763294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1405 1 292 MYB Transcription Factor Family AT1G66230 55.629 1.90e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g1405 Myb_DNA-binding 3.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1405 K09422 - gmx:100792103 428.328