Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1398 ATGGCTGGTCTTGACGGGGTGGTGTCGGTTTTTCGTAATGAAAAGAGTCATCTCCTTACGACCAAATCATGGGATTTCATTGGCCTTACCCAATATGTAGAAACTCTACCCTCTGAAAGTGATGTTATTATTGGGGTACTTGATACTGGAATTTGGCCGGAATCAATCAGTTTTAATGATAAAGGCTTTAGCTCACCACCTACCAAATGGAAGGGAACTTGTGACACTTCTAATTTTCCCTGCAACAATAAAATAATTGGAGCTAAACATTATTTATCTATTCATGATTATCCCCTGAACAAAAATGACATCGAATCTCCAAGAGATTCAGATGGTCATGGCACTCATACGGCATCAACTGCAGCTGGGAATCTGGTTCACATGGCAAGCATGCTAGGATTTGCACAAGGAACAGCAAGAGGCGGAGCCCCATCTGCACGCATTGCTGTCTACAAAATTTGTTGGTCTAGATCAGGATGCTTAGCTTCAAATATTCTTGCCGCATTTGATGACGCAATTGCTGATGGGGTTGATATATTATCACTCTCAGTTGGAGGTTATCCAAAGAACATGATATGTTGTAAAGATGCAATTTCCATTGGTTCATTCCATGCAATGCAACGTGGAGTGTTGACGGTAATGTCAGCGGGGAATGATGGTCCACGTCCTTCATCCCTAAATAATTTTTCACCCTGGGCAATTGTTGTGGGTGCTAGCACGCTAGATAGAAAACTTGTTACCAAGGTCAAATTGGGAAGCAATAGAGTATATGAGGGCATCTCGTTGAACACATTTAACCTTAAGGAAAAACTATACCCTCTTATCTATGGTGGAGATGCACCAAATACTAAAGCAAACATCACTCGAAACCAGTTTTGCTCAACCAACTCATTGAATGATAAGTTGGTGAAGGGTAAAATTATTCTATGTGAAGGAAGTTCAGGAGCCGATGAAGCCTTTAGAGTGCGTGCTGTTGGTGTCTTGAATATACCAAAACCTAATCTTAAAGAAATCGCACAAGTTTTTCCCTTGCCTGCATGTTCCCTTTATCCAACTCCAACCATATTTAGGACCAATGAGTTAAATGATACATTGGCACCTGTGGTTGCATCTTTCTCATCAAGGGGTCCGAGCAAGATTATAGCTGACATTCTAAAGATGAGTTCTAAAAGTAACGGTGATGCAGAATTTAGCTATGGAGCCGGTCAAATTAACCATGTTAAGGCGTTAACTCCTGGCCTAATATATGATACCCAAGTAGATGATTATATTAGATTTTTATGTGGACAAGGAATTGGTACAAAAAATCTGCAACTAATTACTAGGGATGACAACACTTGCTCCAACAAAAAATATGGATCAACACGTGATTTGAATTATCCTTCCTTTGCTCTAAAAGTCCCACACCTTGGAGAAATAAGTGGAAGCTTCCGCCGGACCGTCACCAATGTTGGTTCACCTATCTCTACATATAGATCAATTGTGACGGCCTCAGAAGGATTAAACATTAAAGTGACTCCCAATATTTTGTCATTCACTTCAATTGGAGAAATGAAGAGTTATACTCTCACTATAAATGATGCAATGAAGAAAGCTATTGCATCAGCTTCTTTAGTTTGGGATGATGGGATTTTTAAAGTCAGAAGCCCAATTGTTGTTTATCCCCAACTTCTTATGTTCGCGTTATTGCTATTCTTGTTGGTTTTGCTGCTATTATTTTAA 1722 0.3972 MAGLDGVVSVFRNEKSHLLTTKSWDFIGLTQYVETLPSESDVIIGVLDTGIWPESISFNDKGFSSPPTKWKGTCDTSNFPCNNKIIGAKHYLSIHDYPLNKNDIESPRDSDGHGTHTASTAAGNLVHMASMLGFAQGTARGGAPSARIAVYKICWSRSGCLASNILAAFDDAIADGVDILSLSVGGYPKNMICCKDAISIGSFHAMQRGVLTVMSAGNDGPRPSSLNNFSPWAIVVGASTLDRKLVTKVKLGSNRVYEGISLNTFNLKEKLYPLIYGGDAPNTKANITRNQFCSTNSLNDKLVKGKIILCEGSSGADEAFRVRAVGVLNIPKPNLKEIAQVFPLPACSLYPTPTIFRTNELNDTLAPVVASFSSRGPSKIIADILKMSSKSNGDAEFSYGAGQINHVKALTPGLIYDTQVDDYIRFLCGQGIGTKNLQLITRDDNTCSNKKYGSTRDLNYPSFALKVPHLGEISGSFRRTVTNVGSPISTYRSIVTASEGLNIKVTPNILSFTSIGEMKSYTLTINDAMKKAIASASLVWDDGIFKVRSPIVVYPQLLMFALLLFLLVLLLLF* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1398 573 Pfam Subtilase family 40 379 IPR000209 GO:0006508|GO:0008236
Mal8g1398 573 Pfam Fibronectin type-III domain 457 553 IPR041469 -
Mal8g1398 573 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 1 388 - -
Mal8g1398 573 Gene3D Peptidase S8/S53 domain 388 423 IPR036852 GO:0004252|GO:0006508
Mal8g1398 573 Gene3D Peptidase S8/S53 domain 41 386 IPR036852 GO:0004252|GO:0006508
Mal8g1398 573 CDD Peptidases_S8_3 17 241 IPR034197 -
Mal8g1398 573 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 395 553 IPR045051 -
Mal8g1398 573 Gene3D - 427 555 - -
Mal8g1398 573 ProSiteProfiles Serine proteases, subtilase domain profile. 15 573 - -
Mal8g1398 573 CDD PA_subtilisin_like 249 327 - -
Mal8g1398 573 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 388 IPR045051 -
Mal8g1398 573 Gene3D - 242 362 - -
Mal8g1398 573 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 395 553 - -
Mal8g1398 573 SUPERFAMILY Subtilisin-like 24 385 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1398 Mal-Chr8 26497701 26501024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1398 378 554 Subtilisin-like Serine Gene Family AT5G59190 41.111 2.66e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1398 - - qsu:112001878 523.087