Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1372 ATGGAGAAGACAAGAGGCTTGAGAAAAGGTGCTTGGACATATGAGGAAGATAAGCTACTCAAGGCTTGCATTAACAAGTATGGTGAAGGAAAATGGCATTTAGTTCCTCAAAGAACAGGATTGAATAGGTGCCGAAAAAGTTGTAGATTGAGGTGGTTAAATTATTTATGCCCCAATATCAATAGAGAAAACTTTTCTGAGGATGAAGTTGATATGATTCTGAGGTTACACAAACTCCTAGGGAATAGATGGTCATTGATTGCTGGAAGGCTTCCGGGTAGAACATCTAATGATGTGAAGAACTATTGGCACACACATTTGCTAAAGAAAGCGGTTTCAAAAAAAGAAGAAGAGAAAGAAAAAGAAAAAGAGAAACCTAAAGAAACCATGAAAGCTCATGAAGTTTTTAAGCCACGACCTATAACTTTTTCAACAAATTCACCTTGGTTGAATGGGAAACATAATAATTTTGTGACACAACCAGTACTAGCTTCAAATAAAGATTGTAATGTTCCCATAGAAACTATGGTTCCAAATCAAATTAATAGAGATTGTGTTTCTGCTTCACAACCAAGTCTTGGTAATGCTCCAATGTGGTCGGAAAGTTTATGGAACTTGGAAGAGCAACTAGGCAATGAGGAGAACTTAAATATGGAGTTTCCAAAAGTTGATGACTCGTTTTGGGATTCCAACCTATGTGATTTGGATTCTATTTGGGATCTTTAG 726 0.3664 MEKTRGLRKGAWTYEEDKLLKACINKYGEGKWHLVPQRTGLNRCRKSCRLRWLNYLCPNINRENFSEDEVDMILRLHKLLGNRWSLIAGRLPGRTSNDVKNYWHTHLLKKAVSKKEEEKEKEKEKPKETMKAHEVFKPRPITFSTNSPWLNGKHNNFVTQPVLASNKDCNVPIETMVPNQINRDCVSASQPSLGNAPMWSESLWNLEEQLGNEENLNMEFPKVDDSFWDSNLCDLDSIWDL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1372 241 Gene3D - 2 62 - -
Mal8g1372 241 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Mal8g1372 241 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Mal8g1372 241 Gene3D - 63 137 - -
Mal8g1372 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Mal8g1372 241 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Mal8g1372 241 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 178 - -
Mal8g1372 241 CDD SANT 64 107 IPR001005 -
Mal8g1372 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Mal8g1372 241 CDD SANT 11 56 IPR001005 -
Mal8g1372 241 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mal8g1372 241 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 5 178 - -
Mal8g1372 241 SMART sant 61 109 IPR001005 -
Mal8g1372 241 SMART sant 8 58 IPR001005 -
Mal8g1372 241 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1372 Mal-Chr8 25809675 25811344 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1372 2 168 MYB Transcription Factor Family AT1G66370 55.978 8.83e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g1372 Myb_DNA-binding 7.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1372 - K09422 mtr:MTR_7g017260 350.903