Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1363 ATGGCACTAGCCAACAATAACATTCTACATTGTTCAAGCCTAAGCAACAAGTTTCAAACTTGTGTTTTTGATGAGACTACTATGGAAATTAACTCTGGAATGTCTCATAAAAAATCTATGATTGAAGAAGAAGATGGTTCACAAAGCACTAATGGATTAAGCAATGATACAGCTTCAGCTTCTGCCATTACCAATTCTCCTACTCTAAGCAGAAAAGGGCATGTTTATAACAACACAAGTTATGAGCTTGAAGAAGAGTCTTTGATTAATTTCAAAGGCAATGATGAGTATTACAACAATCTCATGCAAGGTAGTGAATCATTGCTTAGCTTTCAGCAGAGTTGGATGGTTTCCAATGAAAACAATTTGCAACAATGGAATCATGCTAGTCCTAAAACCACCTCAAACTTGTGTATGGTGCAAGGTTTCAATAGCTTTGAAATTTCAAGTGGTAGCTATGGATCCATATTCAATAATGTAAAAGAGAAGCAAAATGGTGAAAGTTCATGTGGATGGTTATACTCTGAACCAAACGTCCCTTGTGATGATGATGATGGTGATGATAGATTAATAAAAGAATCAGAAATACACGAATCGGTCTTGAAGAAACGATCTTTGATGGGGGAGAACTTGCAACCTACCAATGCCAAGAAGCCATGCACAGCTGCAAGTAAAAAAGAAAAACCTAAGTCAAATCCATCCAAGGATCCTCAAAGTGTTGCTGCCAAGAATAGAAGAGAGAGAATAAGTGAGAGGCTCAAGATCCTACAAGAACTTGTACCAAACGGTTCCAAGGTTGATTTGGTTACCATGTTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAGTTACAAGTCAAGGTGTTGGCAGCTGATGAATTTTGGCCTGTCAATGGTGGAAAAGCTCCTGACATTGGTCAAGTAAAACAAGCAATTGATGCCATTCTTTCATCTCAAAGATGA 963 0.3759 MALANNNILHCSSLSNKFQTCVFDETTMEINSGMSHKKSMIEEEDGSQSTNGLSNDTASASAITNSPTLSRKGHVYNNTSYELEEESLINFKGNDEYYNNLMQGSESLLSFQQSWMVSNENNLQQWNHASPKTTSNLCMVQGFNSFEISSGSYGSIFNNVKEKQNGESSCGWLYSEPNVPCDDDDGDDRLIKESEIHESVLKKRSLMGENLQPTNAKKPCTAASKKEKPKSNPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVNGGKAPDIGQVKQAIDAILSSQR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1363 320 MobiDBLite consensus disorder prediction 38 64 - -
Mal8g1363 320 Pfam Helix-loop-helix DNA-binding domain 243 283 IPR011598 GO:0046983
Mal8g1363 320 Gene3D - 227 290 IPR036638 GO:0046983
Mal8g1363 320 MobiDBLite consensus disorder prediction 45 64 - -
Mal8g1363 320 MobiDBLite consensus disorder prediction 202 244 - -
Mal8g1363 320 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 318 - -
Mal8g1363 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 233 282 IPR011598 GO:0046983
Mal8g1363 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 231 291 IPR036638 GO:0046983
Mal8g1363 320 SMART finulus 239 288 IPR011598 GO:0046983
Mal8g1363 320 CDD bHLH_AtIND_like 234 296 - -
Mal8g1363 320 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1363 Mal-Chr8 25611450 25613162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1363 126 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 53.234 2.26e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal8g1363 HLH 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1363 - - gmx:106795957 371.703