Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1361 ATGGCTAACAAATCTGAAGGCATCCATGAAGATGAAACTTCAAGTGTGGAAGAAGGCAACCCTAACATCATGCAACTTTGTTGTTCATCAAATAATACTATAACCTTGATACAAAAGGTGATTGCAGAAATGATTGGAACATATTTTGTGATATTTGCTGGATGTGGTGCTGTAGCAGTGAATAAGATCTATGATGGCTCTGTCACATTTCCAGGGGTATGTATCACTTGGGGTCTGATTGTAATGGTCATGTGTTACTCTGTTGGTCATATCTCTGGAGGACATTTCAACCCTGCTGTTACCATCACTTGGACCCTCTTTCGTCGCATCTCAATTAAAGAGGCTCCACTATACATTTTTGCTCAATTGGTGGGATCAATACTTGCAAGTGGCACATTATCTCTAATGTTTGATATCACATCCAAAACATATTTTGGAACTGTACCAGTTGGATCAAATGGCCAATCTTTAGTTGCTGAAATCATCACCAGTTTTCTCTTAATGTTTGTCATTTCAGCAGTTTCAACAGACGAAAGAGCGGTGAATGATTTGGCAGGTGTTGCAATTGGAATGACTATAATGTTGAATGTCTTTATTGCTGGGCCTGTATCAGGAGGATCTATGAACCCAGCAAGAAGTATTGGTCCTGCACTTATAGTACATGTTTACAAAGGATTATGGGTATACATAGTTGGTCCAATTGTTGGAGCTATAGCTGGAGCAATTGCATATAACTTTCTTAGATCAATAGACAAGTCACCTTCAGAGTTAGGAGATACCCAATTGAGGAACATAATTGTAGGTTGA 807 0.3891 MANKSEGIHEDETSSVEEGNPNIMQLCCSSNNTITLIQKVIAEMIGTYFVIFAGCGAVAVNKIYDGSVTFPGVCITWGLIVMVMCYSVGHISGGHFNPAVTITWTLFRRISIKEAPLYIFAQLVGSILASGTLSLMFDITSKTYFGTVPVGSNGQSLVAEIITSFLLMFVISAVSTDERAVNDLAGVAIGMTIMLNVFIAGPVSGGSMNPARSIGPALIVHVYKGLWVYIVGPIVGAIAGAIAYNFLRSIDKSPSELGDTQLRNIIVG* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1361 268 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mal8g1361 268 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 PANTHER AQUAPORIN NIP2-1 8 256 IPR034294 -
Mal8g1361 268 Gene3D Glycerol uptake facilitator protein. 2 260 IPR023271 -
Mal8g1361 268 PANTHER AQUAPORIN NIP4-1-RELATED 8 256 - -
Mal8g1361 268 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g1361 268 SUPERFAMILY Aquaporin-like 34 252 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1361 Mal-Chr8 25563062 25565079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1361 1 257 Major Intrinsic Protein MIP AT5G37820 61.069 1.44e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1361 K09874 - gmx:100803763 375.941