Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1348 ATGGGTTGTTGCTTTAGTGCTAGAATCAAAGCTGAAAGCCCTCCACGTAATGGTTCGAGTTCGAACGACAGAAGCAAAGAAAATGGCTTGAGTGGTCGAAGCAGTGGCAAGGTCTCCACTGCGCCTACTGCGCCTCCAACTCCTCGAACCGAGGGCGAGATCTTGAAGTCTTCCAATATGAAGAGCTTCACTTTTAGTGAGCTAAAAACTGCTACAAGAAACTTTCGTCCCGATAGTGTGGTTGGTGAAGGTGGGTTTGGAGCTGTATTTAAAGGCTGGATCGATGAGCACACGCTTGTACCGGTCAGACCAGGGACTGGAGTTGTCATTGCTGTCAAGAGGCTTAACCAAGAAGGTTTACAAGGACACAGTGAGTGGCTGACAGAAATCAATTACCTGGGACAGCTGCATCATCCTAATCTTGTGAAACTGATTGGTTACTGCTTCGAAGATGAGCATCGGCTTTTGGTTTACGAGTTTTTGCCCAAAGGCAGTTTGGATAATCACTTATTTCGAAGAGCTTCTTATTTTCAACCACTTTCTTGGCGCATCCGAATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCACAGCGACGAAGCAAAAGTCATATATCGTGACTTTAAAACTTCAAATATATTGCTCGACACTAATTATAATGCAAAACTTTCCGATTTTGGATTGGCTAAAGACGGACCGGCAGGTGATAATAGTCATGTCTCTACAAGGGTAATGGGCACATATGGCTATGCCGCTCCTGAATATATGGCCACAGGTCATTTGACCAAAAAGAGTGATGTATACAGTTTCGGCGTTGTGCTCCTTGAAATTATGTCTGGAAAACGTGCGCTCGACAACAACAGGCCATCTGGGGAACACAATTTAATTGAATGGGCCAAACCTTACCTCAACAGCAAACGCCGGGTCTTCCAAGTTATGGATGCTCGCATTGAAGGCCAATACACATTGCGTGAAGCAATGAAAGTAGCTAACCTTGCTATTCAATGCATCTCCGTTGAACCAAGATTCAGACCGAAAATGGACGAGGTTGTGAGAGTATTGGAGGAACTTCAGGGTTCTTCTGATGACACGGCCGGAGGAGTCGGAAGCTCTCGAGATCAAAATATTAAAAGGAGTGTTCATAGCTCAAGGAATAACAATGGTCCTAGACAACATAGAAGTAATAAACAAAATGTAACAAAAAACAATGAAGTATTAGTTATGTAG 1236 0.4393 MGCCFSARIKAESPPRNGSSSNDRSKENGLSGRSSGKVSTAPTAPPTPRTEGEILKSSNMKSFTFSELKTATRNFRPDSVVGEGGFGAVFKGWIDEHTLVPVRPGTGVVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCFEDEHRLLVYEFLPKGSLDNHLFRRASYFQPLSWRIRMKVALDAAKGLAYLHSDEAKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPAGDNSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSGEHNLIEWAKPYLNSKRRVFQVMDARIEGQYTLREAMKVANLAIQCISVEPRFRPKMDEVVRVLEELQGSSDDTAGGVGSSRDQNIKRSVHSSRNNNGPRQHRSNKQNVTKNNEVLVM* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1348 411 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Mal8g1348 411 Gene3D Transferase(Phosphotransferase) domain 1 161 380 - -
Mal8g1348 411 SUPERFAMILY Protein kinase-like (PK-like) 50 357 IPR011009 -
Mal8g1348 411 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Mal8g1348 411 PANTHER KINASE 1B 29 404 - -
Mal8g1348 411 CDD STKc_IRAK 81 360 - -
Mal8g1348 411 PANTHER OS01G0588500 PROTEIN-RELATED 29 404 - -
Mal8g1348 411 MobiDBLite consensus disorder prediction 1 56 - -
Mal8g1348 411 Pfam Protein tyrosine and serine/threonine kinase 79 357 IPR001245 GO:0004672|GO:0006468
Mal8g1348 411 MobiDBLite consensus disorder prediction 13 56 - -
Mal8g1348 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mal8g1348 411 MobiDBLite consensus disorder prediction 364 411 - -
Mal8g1348 411 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1348 411 MobiDBLite consensus disorder prediction 366 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1348 Mal-Chr8 25337395 25340207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1348 1 365 Glycoside Hydrolase AT3G07070 44.855 2.83e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal8g1348 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1348 - - gmx:100775335 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1348 8 25337395 25340207 Mal8g1348 8 25337395 25340207 ECH
Mal2g2867 2 38069463 38071540 Mal8g1348 8 25337395 25340207 PCT