Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1345 ATGACAATTGGTTTCATGGAGGTGCTTCTGGTGAAAGCAAAGGGTCTTCAAGAGACTGATATCTTTGCTCGCATGGATCCATATGTTCTGTTACAGTACAAAAGGCAAGAGCATAAGAGCAGTGTAGTTCATGAGGGAGGTAGCAGTCCTGTATGGAATGAGAAATTTGTATTCAGAGTGGAATACCCTGGTTCAGGTGACCAATACAAGCTCAACCTTAAAATCATGGACAAGGATGTTTTTTCTTCAGACGATTTTGTTGGGCAGGCCAGCATCTATGTGAAAGATTTGTTGGCGGAAGGAGCAGAGAACGGATCAGCTGAGCTTCGTCCTCGCAAGTATAATGTGGTTCGAGCTGACAATTCTTATTGCGGTGAACTCGAAGTTGGTATAACTTTCACTCGAAAGGAAGATGAATATACTGACGACGACCTTGGAGGATGGAAGGATAGTGAATATTAA 462 0.4286 MTIGFMEVLLVKAKGLQETDIFARMDPYVLLQYKRQEHKSSVVHEGGSSPVWNEKFVFRVEYPGSGDQYKLNLKIMDKDVFSSDDFVGQASIYVKDLLAEGAENGSAELRPRKYNVVRADNSYCGELEVGITFTRKEDEYTDDDLGGWKDSEY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1345 153 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Mal8g1345 153 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
Mal8g1345 153 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Mal8g1345 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
Mal8g1345 153 SMART C2_3c 5 106 IPR000008 -
Mal8g1345 153 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Mal8g1345 153 Gene3D C2 domain 3 135 IPR035892 -
Mal8g1345 153 Pfam C2 domain 7 105 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1345 Mal-Chr8 25314860 25316816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1345 3 109 C2H2 Transcription Factor Family AT4G21160 30.841 1.45e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1345 - - gmx:100500493 275.018