Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1328 ATGGCCGACGCCTTACTCGGAGTTGTGTTTGAGAATTTAATGTCTCTGCTTCAAAATGAATTTTCAACCATTTCCGGAATCAAATCAAAGGCTGAAAAGCTTTCACATACCATACATATCATCAACGCCGTTCTTGAAGATGCTGAGAAGAAACAAGTCACAGACCGCTCTATTAAGGTATGGCTACAACAACTCAAAGATGTTGTTTATGTGCTCGATGATATCCTTGATGAGTGTTCGATAGAGTCTAGTCGACTTAGAGGGTTAACGTCTTTCAAACCAAAGAACATCATGTTTCGTCATGAGATCGGAAACAGGTTGAAAGATATTACAAGGAGATTGGATGATATTGCTGACAGCAAGAACAAGTTCCTTCTACGAGAGGGTACTGGAACTGTTAGAGAAAGCTCAAATGAAGTAGCTGAATGGCGTCAAACGAGCTCCATTATTGCTGAACCAAAAGTGTTTGGACGAGAAGATGATAAAGAAAAGATTGTCGAGTTTCTTCTCACCGAAGCGAGGGATTCTGACTCCCTTTCTGTCTATCCCATAGTTGGTTTAGGTGGTATTGGAAAAACAACTCTTGTTCAATTGGTCTACAATGATGTTAGGGTGAGTGGCAATTTTGATACAAAAATATGGGTTTGTGTTTCTGAGTCTTTCTCTGTCAAAAGGATTTTGTGTTCCATTATAGAATCTATCATAAGAGAGAAGTGTGATGCGTTCGATTTAGATGTAATACAAAGAAAGGCGCAAGAACTGTTGCAAGGTAAAACATATTTGATGATTTTGGATGATGTGTGGAACAAAAATCAACAATTGGAATTTGGATTAAGCCAAGAGAAATGGAATATGTTGAAATTTGTGTTGTCAAGTGGATCCAAAGGTAGTTCAATTTTAGTGTCCACTCGTGGTGAGGTTGTTGCGACAATCATGGGAACTTGTCAAGCTCATCCTTTGTGTGGCCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACATTACAGAGAAGAGCGTGCAGAGCTTGTGGCAATAGGAAAGGAGATTGTAAAGAAATGTGATGGATTGCCTCTTGCAGCACAAGCATTGGGAGGTCTAATGAGCTCAAAGAGCAAAGAAAAGGAATGGCTTGAAATTAAAGAGAGTGAGCTTTGGGCTTTACCATATGAGAATGATATTTTGCCTGCTTTGAGTTTGAGCTACTTTCATTTAACTCCTACCTTAAAGCGGTGTTTCGCTTTTGGTGCTGTGTTTCCAAAAGATACAAAAATCATGAAGGAAGAGTTGATTCATCTTTGGATGGCTAATGGATTTATTTCATCAAGGGGAAATTTGGAGGTTGAAGATGTTGGCAACATGGTTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATCAAGATAGATGAGTATTCTGGAGATATTTCTTTCAAGATGCATGATATTGTCCATGATCTTGCTCAATCAATAATGGGGCAAGAATGTATGTATTTGGAGAATGCAAACATGATTAGTGTGTCAAAAAGCACACACCACATAAGTTTTCACTCCAACCACTTGCTATCATTCGATGAGGGTGCCTTCAAAAAAGTTGAATCCTTGCGAACATTGTTTCAGTTGGATCGTTATATCATACAAAAATATGATCACTTCCCAACAATCCGTTCTCTTCGGATTTTATGCACATCCACTCTCCAGGTACCATCACTAGGGAGTTTAATTCATTTAAGGTATTTGGAGCTTTGTTATCTTGACATAAAAACATTGCCTGACTCAATTTACAACTTACAAAAACTAGAAATCTTGAAAATAATGGTTTGTCGTAAACTGAGTTGTCTTCCGAAAGGCTTGACTTGTTTACAGAATCTTAGACATTTAGTCATTGAAGGTTGTCCTTTGTTTTCTCGTGTGTTTCCTTACATTGGGAAAATATCTTGTCTAAGAACATTAAGTGTGTACATTGTTAGTTTAGAGGAAGGGAATAGTTTGGCAGAGTTACGTCATCTAAACTTAGGAGGAAAACTAAGTATCAAAGGCTTAAAATATGTTGGCAGTTTATTTGAAGCTCAAGCCGCCAATTTGATCGGTAAAAAAGACCTCAAAGAGTTATGCTTGTCATGGAGAAGCAATGATCGATTTACAAAGACCCCAACTATTAGTGTTGAACAACTACTTGAAGTGCTTCAACCTCACTCAAATCTTAGGAGGTTGAAAATTTGTTACTATGATGGATTATTCCTACCAAGTTGGATGAGTATTCTTAGTAATTTGGTTGCTCTTGAACTTATGCTTTGCGACAAATGTGTGCGGCTTCCGTCAATTGGTAAACTACCATCTCTAAAGAAACTGGAATTATCTTTTATGGATAATCTGAAATACTTGGATGATGGTGATGAATCTCACGATGGTATGGAGGTGAGGGTTTTCCCTTCTCTGGAGGTACTCAAGTTAGAAAACCTACGAAACTTAGAGGGGTTATTGAAAGTGGAAAGAGGGAATGTGTTTCCTTGTCTTTCTAGTTTGGATATCCGCTTTTGCCCTAAACTTAGACTGCCATGTCTTGCATATCTTAAAGAACTCGATGTATACGAATGTAATAATGAGTTACTAAGGTCAATCTCTAGCTTATGTGGTCTTACCACCCTTAGCCTGAATGAAGGTAAAGAAATGACATACTTTCCAGAGGGGATGTTCAGAAACCTTACTTGTCTTCAAACTCTTAATGTAAATTATTTCTCAAGATTGAAGGAGCTACCAGAGCACATTTGGGAAGGTCTTCAATCCCTTCGAACTCTAAAAATTCGTGATTGCGAAGGATTGCGATGCTTGCCAGAGGGTATTCGACACATCTCTACTCTCAAGGTTCTGCATATTTATGGTTGCCCAACATTAGAGGAGCGATGTAAGAAGGGAACAGGAGAGGACTGGTACAAGATATCACATATTCCGGAATTATATGTTTCGTGGTGA 2988 0.3822 MADALLGVVFENLMSLLQNEFSTISGIKSKAEKLSHTIHIINAVLEDAEKKQVTDRSIKVWLQQLKDVVYVLDDILDECSIESSRLRGLTSFKPKNIMFRHEIGNRLKDITRRLDDIADSKNKFLLREGTGTVRESSNEVAEWRQTSSIIAEPKVFGREDDKEKIVEFLLTEARDSDSLSVYPIVGLGGIGKTTLVQLVYNDVRVSGNFDTKIWVCVSESFSVKRILCSIIESIIREKCDAFDLDVIQRKAQELLQGKTYLMILDDVWNKNQQLEFGLSQEKWNMLKFVLSSGSKGSSILVSTRGEVVATIMGTCQAHPLCGLSDNECWLLFKQYAFGHYREERAELVAIGKEIVKKCDGLPLAAQALGGLMSSKSKEKEWLEIKESELWALPYENDILPALSLSYFHLTPTLKRCFAFGAVFPKDTKIMKEELIHLWMANGFISSRGNLEVEDVGNMVWNELCQKSFFQDIKIDEYSGDISFKMHDIVHDLAQSIMGQECMYLENANMISVSKSTHHISFHSNHLLSFDEGAFKKVESLRTLFQLDRYIIQKYDHFPTIRSLRILCTSTLQVPSLGSLIHLRYLELCYLDIKTLPDSIYNLQKLEILKIMVCRKLSCLPKGLTCLQNLRHLVIEGCPLFSRVFPYIGKISCLRTLSVYIVSLEEGNSLAELRHLNLGGKLSIKGLKYVGSLFEAQAANLIGKKDLKELCLSWRSNDRFTKTPTISVEQLLEVLQPHSNLRRLKICYYDGLFLPSWMSILSNLVALELMLCDKCVRLPSIGKLPSLKKLELSFMDNLKYLDDGDESHDGMEVRVFPSLEVLKLENLRNLEGLLKVERGNVFPCLSSLDIRFCPKLRLPCLAYLKELDVYECNNELLRSISSLCGLTTLSLNEGKEMTYFPEGMFRNLTCLQTLNVNYFSRLKELPEHIWEGLQSLRTLKIRDCEGLRCLPEGIRHISTLKVLHIYGCPTLEERCKKGTGEDWYKISHIPELYVSW* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1328 995 CDD RX-CC_like 2 119 IPR038005 -
Mal8g1328 995 Gene3D - 137 317 IPR027417 -
Mal8g1328 995 PANTHER OS05G0414200 PROTEIN 28 947 - -
Mal8g1328 995 Pfam NB-ARC domain 158 386 IPR002182 GO:0043531
Mal8g1328 995 Gene3D Ribonuclease Inhibitor 662 858 IPR032675 -
Mal8g1328 995 Gene3D Ribonuclease Inhibitor 859 977 IPR032675 -
Mal8g1328 995 PANTHER DISEASE RESISTANCE PROTEIN RP 28 947 IPR044974 GO:0006952
Mal8g1328 995 Gene3D Ribonuclease Inhibitor 496 659 IPR032675 -
Mal8g1328 995 Pfam Rx N-terminal domain 6 101 IPR041118 -
Mal8g1328 995 Gene3D - 405 495 IPR036388 -
Mal8g1328 995 Gene3D - 322 404 IPR042197 -
Mal8g1328 995 SUPERFAMILY L domain-like 470 986 - -
Mal8g1328 995 PRINTS Disease resistance protein signature 254 268 - -
Mal8g1328 995 PRINTS Disease resistance protein signature 181 196 - -
Mal8g1328 995 PRINTS Disease resistance protein signature 781 797 - -
Mal8g1328 995 PRINTS Disease resistance protein signature 358 372 - -
Mal8g1328 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 418 IPR027417 -
Mal8g1328 995 Gene3D - 6 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1328 Mal-Chr8 24970424 24973411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1328 184 792 WRKY Transcription Factor Family AT5G45050 23.124 1.23e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1328 - - mtr:MTR_5g071220 1520.37