Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1304 ATGACAGGATTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGCTAGTGATTGTGTTTTTGCTCCTTACTTCTCCTATGAACAGGCTTCAACTCATTTTTCAGCAGTGCATAAGGTTTATGGAGCTAGTAATGTCTCTAGACTATTGTCACATCTTCCTATTCAAAATAGAAGTGATGCTGCCATCACTTTATCTTATGAAGCCTTGGCTCGCATGCAAGATCCTATTTATGGTTGTGTTGCTCATATCTATGCATTGCAACATCAGGTTGCAAGCTTGCAAGAGGAGATAGATATTCTTGGAAGTGTAATGGCAAATTCTAGTGTTAGTGTTATGAATTGTGGCAATGTCCAAGCACCGATGAACTCAAACAATGGAACACAATATTACCATAATCAAAGTTTTGAATCATACATGGATATGGAGCTAATTCCTAATGAACATGGAACGGCAGAGGCTAATTTATATGATGGTTCCAATTCCAATCCGTTAGAGAAATTCCTATCAGGAATTGATCAAGAGGGATTCCTGAACCACCCTTGGTTCAAGCATAACTCAGACATGAAGAACTAG 585 0.3915 MTGFGSSCGACKFLRRKCASDCVFAPYFSYEQASTHFSAVHKVYGASNVSRLLSHLPIQNRSDAAITLSYEALARMQDPIYGCVAHIYALQHQVASLQEEIDILGSVMANSSVSVMNCGNVQAPMNSNNGTQYYHNQSFESYMDMELIPNEHGTAEANLYDGSNSNPLEKFLSGIDQEGFLNHPWFKHNSDMKN* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1304 194 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Mal8g1304 194 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Mal8g1304 194 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 192 - -
Mal8g1304 194 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1304 Mal-Chr8 24273046 24274394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1304 1 187 AS2 family AT5G06080 51.323 2.76e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal8g1304 LOB 2.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1304 K13945 - gmx:100809636 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1304 8 24273046 24274394 Mal8g1304 8 24273046 24274394 ECH