Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1303 ATGACGAATCGGTGGTGGGATGGAAGAGCAACGGAGGCGAACCCGAACCCGGTCGAAGGAGAGAACCAAACCGTTCCGACCCGGGTTGTGTTACGAAGAAACCCGCCAAGGGAAAGTAACGGTAACGCTAACGGTAACGGAAACGTTACTCCGACGAGGAGCAACACAAGCACCGTTAACATTAACGGTGAACTCGAGACCAGCAATGGCCGTTCAGGTGAAGAGCAGAACACTGGAAGTGGACGCCGGCCACGTGGACGTCCGCCGGGGTCGAAAAACAAGCCAAAACCGCCGGTGACGATCACAAAAGAAACTCCAAACGCGCTTCATAGCGTTATCTTGGAAGTCGCCGGCGGAAGTGACATCGCCGAGAGTATTACCAACTACGCTAACCGTCGCCACCGTGGTGTTTCGATTCTCAGCGGCTCTGGTTATGTTACCAGTGTGACTCTCCGGCAGGATAATGTGCCGGGAAGAATTATGTCTCTTACAGGAAGGTATAACATTCTGTCGCTTTCAGGTGCTTTTTTGCCTCCGCCGTCGCCGCCGGAGGCTACTGGGCTGACTATTTATCTTAATGGAGGTAATGGGCAGATTATTGGAGGCTTGGTTGTTGGATCGGTGGTTGCGTCGGGGCCAGTGATGGTTGTTGTTGCTACTTTTGCTAATGCTACTTATGAGAGGTTGCCTTTGGAAGATGAACAAGGTGATGAAGAGAATTTGCAAGAGATTGATGACAATAATCATGTTCTTAACAATGGTAATCATGTTGTTAATGGTGATGCTGGTTCTCTTTCTGGGTCTGGAAGTGGAAGTGGTGGTGGTACCGGTGGTGGTGGTGGTGGTGGCGTAACTTCTCATGGATTAGGTGAATTCCATTTGAATCCAAGTTTGATGCAAAATGGTGGTGGGCATGGACACAACGTGGGACACAATGTGTTCTGGCGTCCACATCCACCTCCGTATTGA 969 0.5057 MTNRWWDGRATEANPNPVEGENQTVPTRVVLRRNPPRESNGNANGNGNVTPTRSNTSTVNINGELETSNGRSGEEQNTGSGRRPRGRPPGSKNKPKPPVTITKETPNALHSVILEVAGGSDIAESITNYANRRHRGVSILSGSGYVTSVTLRQDNVPGRIMSLTGRYNILSLSGAFLPPPSPPEATGLTIYLNGGNGQIIGGLVVGSVVASGPVMVVVATFANATYERLPLEDEQGDEENLQEIDDNNHVLNNGNHVVNGDAGSLSGSGSGSGGGTGGGGGGGVTSHGLGEFHLNPSLMQNGGGHGHNVGHNVFWRPHPPPY* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1303 322 CDD DUF296 113 221 IPR005175 -
Mal8g1303 322 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 235 - -
Mal8g1303 322 Gene3D - 110 250 - -
Mal8g1303 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 42 259 - -
Mal8g1303 322 MobiDBLite consensus disorder prediction 1 106 - -
Mal8g1303 322 MobiDBLite consensus disorder prediction 37 79 - -
Mal8g1303 322 MobiDBLite consensus disorder prediction 252 273 - -
Mal8g1303 322 MobiDBLite consensus disorder prediction 252 305 - -
Mal8g1303 322 ProSiteProfiles PPC domain profile profile. 106 244 IPR005175 -
Mal8g1303 322 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 259 IPR014476 GO:0003680
Mal8g1303 322 Pfam Plants and Prokaryotes Conserved (PCC) domain 112 222 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1303 Mal-Chr8 24254210 24255178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1303 82 235 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.688 1.82e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1303 - - cam:101507777 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1303 8 24254210 24255178 Mal8g1303 8 24254210 24255178 ECH