Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1290 ATGGCTGAGATTTGTTGCGGTGTTGTTGGAGAAGAAGAAACTCTTACTCTTCCTATTGAACCAAGCTCAAGACCTTCCGGTCGCCGGAGTTTGGATGTGCTTCCGTTGAAATACATGGCAGATCCGCCGGAGAATAGCCGGAAGCGACAAAAGCTAGATCCACCAGCTCCGTGGGATGCAGTTGATAGCTGTGAATCAAGTACCGATGAAGAATCAAAGGAAAACGAGATTGTTGTTGTTGAAGAGTGTTCTCTTAAATATGGAATAACATCGGTTTGTGGAAGGAGAAGAGAAATGGAAGACACGGTTTCAGTTCATCCATCGTTTTGTAAAGAAAAGAATGAACAAAATCAAAATCAGTGTCATTTCTTCGGTGTCTACGACGGTCATGGTTGCTCTCATGTTGCGACTATGTGTAAAGAAAGGTTGCATGAAATTGTTGATGATGAAATAGAGAAAGTGGAAGATAAGGTTGACTGGAAGTCAACGATGGAGAAGAGTTTCATTCGAATGGATGAAGAAGTGTTGAATTCTAGCAAAACCAAACAAAGCTTCACTTGCAAGTGTGAGCTTCAAACTCATCATTGTGATGCAGTTGGTTCCACTGCTGTTGTTGCCGTAGTTACGCCGGAAAAAATAATTGTCTCAAATTGTGGTGATTCTCGTGCCGTTCTTTGCCGGAATGGGGTTGCCATTCCTCTTTCCTCCGATCACAAGCCGGATCGACCCGATGAGTTGGATCGGATTAACAAAGCTGGAGGACGTGTGATCTACTGGGATGGTGCAAGAGTGCTTGGAGTGTTGGCCATGTCAAGAGCCATTGGTGACAATTATTTGAAGCCGTATGTTATTTCGGAATCGGAGGTAACCGTAACGGAGAGGAGTGATGAAGATGAGTGTTTGATACTTGCGAGTGATGGATTATGGGACGTGGTACAAAACGACACAGCATGTAAGGTGGTGCAGATGTGTCTCAAGGCGGAGAAGATGGTGTCGCGGCCGGGGTCTCCGGGGAGTGAGGTAGTGGGAAATGGTTCAAATAAGGCGTGTTCCGATGCTTCAATTCTGTTGACGAAGTTGGCTTTGGCGAGGAATAGTTCGGACAATGTTAGCGTGGTGGTTGTTAATTTGAGGAGTGATCAACGTCAACAATAA 1155 0.4502 MAEICCGVVGEEETLTLPIEPSSRPSGRRSLDVLPLKYMADPPENSRKRQKLDPPAPWDAVDSCESSTDEESKENEIVVVEECSLKYGITSVCGRRREMEDTVSVHPSFCKEKNEQNQNQCHFFGVYDGHGCSHVATMCKERLHEIVDDEIEKVEDKVDWKSTMEKSFIRMDEEVLNSSKTKQSFTCKCELQTHHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELDRINKAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISESEVTVTERSDEDECLILASDGLWDVVQNDTACKVVQMCLKAEKMVSRPGSPGSEVVGNGSNKACSDASILLTKLALARNSSDNVSVVVVNLRSDQRQQ* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1290 384 CDD PP2Cc 86 328 IPR001932 -
Mal8g1290 384 Gene3D - 73 384 IPR036457 -
Mal8g1290 384 PANTHER ALPHABET, ISOFORM E-RELATED 37 383 - -
Mal8g1290 384 MobiDBLite consensus disorder prediction 17 73 - -
Mal8g1290 384 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Mal8g1290 384 Pfam Protein phosphatase 2C 86 370 IPR001932 -
Mal8g1290 384 SUPERFAMILY PP2C-like 78 378 IPR036457 -
Mal8g1290 384 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 37 383 - -
Mal8g1290 384 SMART PP2C_4 76 375 IPR001932 -
Mal8g1290 384 ProSiteProfiles PPM-type phosphatase domain profile. 86 377 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1290 Mal-Chr8 23821233 23822979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1290 62 384 PP2C-type Phosphatase Gene Family AT1G07430 58.475 3.56e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1290 K14497 - gmx:100776356 508.449