Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1284 ATGAAGGCATTGATTCTTGTTGGGGGGTTTGGAACTAGATTGAGGCCATTGACACTCAGTGTCCCTAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATTCTGCATCAGATAGAGGCTCTTAAGGCCACTGGAGTTACTGAAGTGGTACTGGCCATTAATTACCAACCAGAGGTTATGCTGAATTTCTTGAAGGATTTTGAAGCAAAGCTTGGGATTAAGATTAGTTGTTCACAAGAAACTGAACCACTAGGAACTGCAGGCCCCCTGGCTCTTGCTAGGGATAAGTTGATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAACAAATGATTGAGTTCCACAAATCCCATGGAGGGGAAGCTTCCATAATGGTAACAAAGGTTGATGAGCCATCAAAATATGGTGTGGTTGTTATGGAGGAGACAACAGGGCAGGTTGAGAAATTTGTTGAAAAACCAAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATTTATCTATTGAACCCCTCTGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAAAAAGAAATTTTTCCAAAGATTGCTGCAGAGAAAAAGCTATATGCAATGGTCCTGCCTGGATTCTGGATGGACATCGGACAACCGAGAGACTATATCACTGGCTTGAGGCTTTACCTGGACTCACTGAGGAAAAGGTCTTCTTCTAAGTTGGCTAGTGGCTCTAACATTGTGGGGAATGTCATTGTGGATGAAACAGCCAAAATCGGCGAGGGATGTCTCATTGGACCTGATGTCGCTATCGGTCCTGGCTGCATTGTTGAGCCTGGTGTGAGGCTCTCGCGCTGTACAGTAATGCGAGGAGTCCGGATTAAGAAACATGCTTGCATATCCAGCAGTATTATTGGGTGGCATTCCACTGTTGGGCAATGGGCTCGAGTGGAGAATATGACCATCCTTGGAGAAGATGTTCATGTTTGTGATGAGATTTACAGCAATGGTGGTGTGGTTTTGCCTCACAAGGAGATTAAGTCAAATATTCTGAAGCCTGAGATTGTCATGTAA 1086 0.4365 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKATGVTEVVLAINYQPEVMLNFLKDFEAKLGIKISCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKQMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPKIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKRSSSKLASGSNIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVEPGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1284 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 232 IPR029044 -
Mal8g1284 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Mal8g1284 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Mal8g1284 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Mal8g1284 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Mal8g1284 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Mal8g1284 361 Gene3D Hexapeptide repeat proteins 236 358 - -
Mal8g1284 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1284 Mal-Chr8 23741846 23743459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1284 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 23.116 2.19e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1284 K00966 - gmx:100808375 668.692