LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal8g1269	ATGGCTGGACTTGATGGGGTAGTGTCTATCTTTCCTGATAAAAAGAGGCATTTACTGACAACAAAATCATGGGACTTCATAGGCTTTCCGCAATATGTGGAGAGGAAATACTCTGAATCTGATGTCATTATAGGAGTGATCGATTCTGGAATTTGGCCAGAATCTGATAGTTTCAACGACAAAGGGTTTAGTCCACCTCCAAGCAAATGGAAGGGATTTTGTGATGCTAATTTCACATGCAACAATAAAATCATTGGAGCTAGGTATTATCCAATTAGTTTTGATGATTTTGGATCTCCAAGAGACTCTGTGGGTCATGGGACTCATGTAGCATCGACAGCAGCTGGTAACATAGTTAGCCAGGCAAGTATGTTAGGATTAGGAAGGGGAACATCTAGAGGTGGGGCTCCATCAGCACGGATTGCTGTATACAAGGTATGTCGGTCTTCTGCTTGTGATACTGCAAACATCCTTGCGGCTTTCGATGATGCAATTGCAGACGGGGTGGACATATTATCAGTTTCTATTGGAGGAGAAATAGAAAATCATCATAGCATTTTTATAGATCCATTATCCATTGGATCTTTTCATGCGATGAAAAATGGAGTATTAACAGTCTTTGCAGCAGGAAACGATGGTCCAAAACCTGCAACCTTAGATAATTTTTCACCTTGGTCAGTTGTTGTGGGTGCTGGAACCATAAGTAGAAAATTTGTTACCCAAGTAAAATTAGGTGACAACAACATTTATGAGGGTATCTCTATAAATACGTTCGACCTTTCGGGAAACATGTATCCTATTATTTATGCTGGAGATGCACCAAACACTGAAGCTGGCTTCAATGGACACAAATCTAGGCTTTGCTCACCCAATTACCTAGATGGTAAGATGGTCAAAGGTAAAATTGTTTTGTGCGGAGGTAGCGGAGGAAGTGAAGAAGCCTTTAGAGTTGGTGCTATTGGTGTCATAACACAAGGTCAAACTTCAAGAGATACTGCATTCTCTTTACCCTTGCCTGGATGTGACCTTCAAACAAAGGATGCCAAGAAAATACATAAGTACATAGATTCTACAAGGACTCCAATAGCAACCATCTTTAAAACAAATGAGTTAGAAAATACTTTGGCACCCGTGGTTGCATCTTTTTCAGCAAGGGGTCCTAGCTTAGTTACACCAGATATTCTGAAGCCGGATTTGATTGCTCCCGGAGTAGATATATTAGCTAGTTGGTCTCCAATTGGCTCTGCTTCTGAAGTTGATGGTGACACTAGAAAACTAGAATTCAACATAGTGTCAGGAACATCGATGGCATGTCCACATGTATCTGGTGCAGCGGGTTACATTAAGTCATTTCAACCTACATGGTCACCTGCTGCTATCCGTTCTGCTTTAATGACAACTGCTAAACAGTTGAGTCCGATCAATAATAACGATGCAGAGTTTGCCTATGGAGCAGGTCAAATTGACCCTGTGAAAGCCTTGAACCCTGGCTTAATATATGATGCTAATGAAAGGGACTACATAATGTATTTATGTGGACAAGGCTACAACAAAACAATTCTGCAACTAATCAGTGGGGATGACATCAGCTGTTGCAACACAACAAGTACATCAGCAAATTTAAACTACCCATCATTTGCTCTAAAAGCATCACATCCTAAAGATCAAATAAGTGGGAGTTTTAAACGAACCGTCACAAATGTTGGATCACCAACGTCTACTTATAGAGCATTCGTGACCACCCCCAGCGGACTTGATGTTTCAGTGGTGCCCGATGTTTTGTCATTTTCTTCGTTGGGAGAGCAGCAAACATATGTCCTCACCATAAATGGAGCACTGGAAGAAGAACCTATTTTGTCAGCATCATTAGTTTGGGATGATGGTTTATTTCATGTGAGGAGCCCTATTATAGTATATGACCAACGGGCTGAGAAAATAATTACATCTCCAAGTATCTTTCTTATAGTTGCTATTAGTGTTGGTCCAAGCACAACAAAAGGGCAAAGGCTAAAGGCTACACCACTCCATGTAAGACATAAACCAGTCCAATAA	2052	0.4084	MAGLDGVVSIFPDKKRHLLTTKSWDFIGFPQYVERKYSESDVIIGVIDSGIWPESDSFNDKGFSPPPSKWKGFCDANFTCNNKIIGARYYPISFDDFGSPRDSVGHGTHVASTAAGNIVSQASMLGLGRGTSRGGAPSARIAVYKVCRSSACDTANILAAFDDAIADGVDILSVSIGGEIENHHSIFIDPLSIGSFHAMKNGVLTVFAAGNDGPKPATLDNFSPWSVVVGAGTISRKFVTQVKLGDNNIYEGISINTFDLSGNMYPIIYAGDAPNTEAGFNGHKSRLCSPNYLDGKMVKGKIVLCGGSGGSEEAFRVGAIGVITQGQTSRDTAFSLPLPGCDLQTKDAKKIHKYIDSTRTPIATIFKTNELENTLAPVVASFSARGPSLVTPDILKPDLIAPGVDILASWSPIGSASEVDGDTRKLEFNIVSGTSMACPHVSGAAGYIKSFQPTWSPAAIRSALMTTAKQLSPINNNDAEFAYGAGQIDPVKALNPGLIYDANERDYIMYLCGQGYNKTILQLISGDDISCCNTTSTSANLNYPSFALKASHPKDQISGSFKRTVTNVGSPTSTYRAFVTTPSGLDVSVVPDVLSFSSLGEQQTYVLTINGALEEEPILSASLVWDDGLFHVRSPIIVYDQRAEKIITSPSIFLIVAISVGPSTTKGQRLKATPLHVRHKPVQ*	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal8g1269	683	SUPERFAMILY	Subtilisin-like	18	498	IPR036852	GO:0004252\|GO:0006508
	Mal8g1269	683	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	106	116	IPR022398	-
	Mal8g1269	683	Gene3D	-	511	641	-	-
	Mal8g1269	683	PRINTS	Subtilisin serine protease family (S8) signature	39	58	IPR015500	-
	Mal8g1269	683	PRINTS	Subtilisin serine protease family (S8) signature	102	115	IPR015500	-
	Mal8g1269	683	PRINTS	Subtilisin serine protease family (S8) signature	432	448	IPR015500	-
	Mal8g1269	683	Pfam	Subtilase family	40	486	IPR000209	GO:0006508\|GO:0008236
	Mal8g1269	683	Gene3D	-	235	372	-	-
	Mal8g1269	683	ProSiteProfiles	Serine proteases, subtilase domain profile.	23	494	-	-
	Mal8g1269	683	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	3	645	IPR045051	-
	Mal8g1269	683	CDD	PA_subtilisin_like	242	365	-	-
	Mal8g1269	683	Pfam	Fibronectin type-III domain	540	638	IPR041469	-
	Mal8g1269	683	CDD	Peptidases_S8_3	17	468	IPR034197	-
	Mal8g1269	683	ProSitePatterns	Serine proteases, subtilase family, serine active site.	433	443	IPR023828	-
	Mal8g1269	683	Gene3D	Peptidase S8/S53 domain	41	507	IPR036852	GO:0004252\|GO:0006508
	Mal8g1269	683	PANTHER	CUCUMISIN-LIKE	3	645	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal8g1269	Mal-Chr8	23412074	23417089	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal8g1269	1	639	Subtilisin-like Serine Gene Family	AT5G59100	48.930	0.0	612

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal8g1269	-		-	cam:101506276	895.575