Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal8g1186 | ATGCAGGTAAATGAGGACAAGTTTCATGTTGTAGACATAGACAACAATGTCTGTCACCGGAGTAATGAACGATGTTCTAACTCCGGTGACCGGTTAGATGAGGATCAAAGGTGTGAGATTGTGGGAGTGTCTGAAAAACAAAGAGAGTCCATTGATTCATCTGAATCAGTTGAATCAGAATGTTCTGTGGAGTTGGATCTGGATGATGTAGTAGTTTCTGATGTTAAGGTGCATTTGGATAAGGTTGAGAGGGATTGTAGGATTTGTCATCTTAGTATGGATATGACAAATCATGAATCTGGAATTCCTATGGAGCTTGGATGTTCTTGTAAAGAGGATTTGGCTGCTGCTCATAAACATTGTGCTGAGGCTTGGTTCAAGATTAAAGGCAACAAAACTTGTGAAATCTGTGGATCAATTGCGCACAATGTCGCCGGTTCTATTGAAGTTCAAATGACAGAACAGTTTAATGAATCAAGTGATCCCTCCATTGTACCACCAACTGGACCATCACCGCCATCAGAAACTCGAAATTTTTGGCAGGGACATCGGTTTTTGAATTTCCTTCTAGCATGTATGGTTTTCGCCTTTGTCATATCATGGCTTTTTCACTTTAATGTTCCCTCTTGA | 630 | 0.4048 | MQVNEDKFHVVDIDNNVCHRSNERCSNSGDRLDEDQRCEIVGVSEKQRESIDSSESVESECSVELDLDDVVVSDVKVHLDKVERDCRICHLSMDMTNHESGIPMELGCSCKEDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVAGSIEVQMTEQFNESSDPSIVPPTGPSPPSETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal8g1186 | 209 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Mal8g1186 | 209 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 9 | 209 | - | - | |
Mal8g1186 | 209 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 72 | 146 | IPR013083 | - | |
Mal8g1186 | 209 | SUPERFAMILY | RING/U-box | 83 | 140 | - | - | |
Mal8g1186 | 209 | CDD | RING_CH-C4HC3_MARCH | 86 | 138 | - | - | |
Mal8g1186 | 209 | SMART | ringv_2 | 85 | 138 | IPR011016 | GO:0008270 | |
Mal8g1186 | 209 | Pfam | RING-variant domain | 86 | 137 | IPR011016 | GO:0008270 | |
Mal8g1186 | 209 | PANTHER | ZINC FINGER, RING-CH-TYPE | 9 | 209 | - | - | |
Mal8g1186 | 209 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 78 | 144 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal8g1186 | Mal-Chr8 | 18423107 | 18425253 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal8g1186 | 42 | 209 | C3H Transcription Factor Family | AT5G05830 | 63.158 | 3.57e-70 | 211 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal8g1186 | - | - | mtr:MTR_5g081560 | 376.711 |