Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1158 ATGGAAGAGAGCATGTCAGGCTTTTGCATGAAATCATCTGGAAGCAGCAGTAGCAGCACTGGCACAAAGTGTGGTCGTTGGAATCCAACAACAGAACAAGTTAAACTTCTGACTGAACTTTTCAGAGCAGGGCTCAGAACTCCAAGCACTGATCAAATTCAAAAAATATCAAATCAACTTAGTTTTTATGGTAAGATTGAGAGCAAAAATGTGTTTTATTGGTTTCAAAATCACAAAGCTAGGGAAAGACAAAAACGTCGTAAGGTGGTTTCCTTTGATGATGACAAGGATGTCATAGTTCATAATCATAGAGACAACAACTCTATCAATGCTTCAACACAAAGGTTTGCTGAGATGTACTCAGAGCCTGATAGAGTGATTGAGACTCTTGAGCTTTTTCCATTGAACTCATTTGGTGAATCAGAATCAGAGAAGTGGAATATGCATGCAAATGAATGCAGGGAAAATACAATGTTTGCATACACATGTACAATGGGAGAACAAATGGAGCATCCACCATTAGACTTGCGGTTGAGCTTTGTGTAA 546 0.3883 MEESMSGFCMKSSGSSSSSTGTKCGRWNPTTEQVKLLTELFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVVSFDDDKDVIVHNHRDNNSINASTQRFAEMYSEPDRVIETLELFPLNSFGESESEKWNMHANECRENTMFAYTCTMGEQMEHPPLDLRLSFV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1158 181 CDD homeodomain 26 86 IPR001356 GO:0003677
Mal8g1158 181 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 167 IPR044555 GO:0003700|GO:0099402
Mal8g1158 181 Pfam Homeodomain 24 84 IPR001356 GO:0003677
Mal8g1158 181 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Mal8g1158 181 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 167 - -
Mal8g1158 181 MobiDBLite consensus disorder prediction 1 26 - -
Mal8g1158 181 Gene3D - 23 90 - -
Mal8g1158 181 SMART HOX_1 22 89 IPR001356 GO:0003677
Mal8g1158 181 MobiDBLite consensus disorder prediction 8 26 - -
Mal8g1158 181 SUPERFAMILY Homeodomain-like 25 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1158 Mal-Chr8 18010238 18011447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1158 1 181 Wox Gene Family AT3G11260 54.688 1.10e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal8g1158 Homeodomain 5.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1158 - - cam:101494967 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1158 8 18010238 18011447 Mal8g1158 8 18010238 18011447 ECH
Mal2g2751 2 35948675 35949336 Mal8g1158 8 18010238 18011447 PCT