Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1147 ATGAGAATTTTTATGACATTACTTCTCTGCTTTGCTATTCAAATGTTCGTGTATTACATGCCCTCAGCTACTGTTACTCTTGCTTTGAGTTCAGAGACTGATAAACATGCTTTGCTTGCTTTGAAGGAAAAACTTACAAATGGTGAACCAGATTCTTTGCCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGTGTTACATGTGGTCGTCGTCACATGAGAGTCTCTGCCTTGCATTTGGAAAATCAAACATTGGGTGGTACTCTTGGATCATCCTTGGGAAATCTAACATTTCTCACAAGACTGCGACTTAGAAACGTCAATTTGCATGGTGAAATTCCAAAACAAGTTGGTCGTTTAAAGCGATTGCAAGTTCTTAACTTAGGCAAGAACCATCTTCAAGGAGAGATTTCTATAGAATTGACCAACTGCACAGACCTTAGCATACCTTATTCTTTGGGTAGGTTGTCAAGTTTGAACAGTCTAAGTCTAAGTTTAAACAAACTGTCAGGTGAAATCCCTCACTCTCTTTACAATCTATCAAATATTCAGCTTTTTGATTTAGCAGAAAACAACTTATTTGGTACTCTTCCATCAAATATGAATCTTGCTTTTCCCAATCTTAAAAATATCTATGTAGGACAGAATCAAATCAGAGGAACTTTTCCATCTTCAATAACCAACCTTACTGAATTGCAAGATTTTGATATAGCATCTAATGATTTTAATGGGCCAATACCTTTAACTTTGGGTCGATTAAATAAACTTGAGTGGTTTAATATTACCGGTAATGATTTTGGGAGTGGAGGATCTCCCGATTTGGACTTTCTTTCCTCATTAACCAACTGTACTCAATTTGGGAAGTTGTCTGATGTCATAGGAAATTTTTCCATTCATCTTAGTTGGCTTGATATGGGAGAAAACCAAATATATGGAGTGATACCTGATAGAATTGGAAAACTAATTGGTTTAACATTCTTCAGCATTGGAAACAACTCAGTTGAGGGAACAATTCCAAATTCAATTGGGAAGTTAAAGAATCTAGCAAAATTGGTTTTGCAAGAAAATAAATTATCTGGTAATATTCCTACAAGTATTGGCAATCTTACTTTATTGTCTGAGCTATTTCTTGGTGGGAATAAATTGAAAGGAAGCATTCCATTTACCCTCAGATATTGCACCCAATTGCAGAAATTAAGTGTTGCAAATAACAAATTGAGTGGTGATATACCCAATCAAACGTTTATATATCTAAAATATTTAGTACATCTGTTCTTGCTCAAAAACTCTTTGACCGGTCTTATTCCTTCAGAGTTTGGTAACATGAAGCAACTTTCAGTATTACATCTCAGCTCAAACAAGTTTTCTGGTGAAATTCCAAAAGATCTTGCTACTTGTTTGGCCTTAACAGAGCTTGCATTGGGGGGGAACTTTTTACATGGAGTTGTACCTTCTTTCTTGGGCTCTTTAAGATCCCTAAATCTCTTAGACCTTTCTAACAACAAACTCTCCAGCATAATCCCCTTTGAACTAGAAAATCTGACACTTTTGAATACTTTGGACCTGTCTTATAACAATCTTTTTGGTGAGGTTCCCATAGGAGGTGTCTTTAGCAATGTTTCAGCGATTTCAATGACCGGAAACAAAAACCTTTGTGGAGGAATCCCTCAATTGAAGCTTCCCTTGTGCTTTAAGGCATCCTCCAAGAAACAAAAAAGATCTTTCAAAAAGAAACTTATTCTCATCAGTGTAATTGGTGGGTGTTTGATCTCTTTCATAGCTTTAATAATTGTCCATTTTTTCACGAGAAAGCGCAAAATGTCACCCTCTTCACAATCTTTGCAAAATGGGAACCTCAGGGTTACTTATGGTGAGATACATGAAGCAACCAATGGTTTTTCTTTATCTAATTTGGTTGGAACAGGTAGTTTTGGATCTGTTTACAAAGGATCTCTTCTCAATTTTGAAAGACTTATCGCTGTAAAAGTGTTGAATCTTGAAACACGTGGGGCAACAAAGAGTTTCATTGCTGAATGTACAGCTCTAGGAAAGTTGAAGCACCGGAATCTTGTCAAGATCCTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGTCAAATGGGAGTCTTGAAAAGTTTTTGCACGATAATGAAGGGTCTGAAAATCATAATCTCAACCTCACACAAAGGTTAGACATTGCTCTTGATGTAGCTCATGCATTGAATTATCTTCACAATGATGTAGAGCAAGCCGTAGTTCATTGTGATATTAAGCCAAGCAACGTTCTTCTTGACGATGATATTGTAGCCCACTTAGGAGACTTTGGCTTATCTAGGCTCATTCTTGGAACCACAGAGCATTCAAGTAAAGATCAAGTAATTTCCTCTACAATTAAAGGAACTATAGGATATGTTCCTCCTGAGTACGGAGCTGGTGTTCCAGTATCACAACAGGGAGATATCTACAGCTTTAGGATTCTTCTGTTAGAGATGCTCACCGGAAAGAGACCAACTGATAGTATGTTTTTTGAGAATTTGAGCCTACACAAGTTCTGTAAAATGAATTTGTCTGAAGGAATCCTTGAGATAGTTGACCGAAGTTTGCTTATGTCGTTTGTTGAAGATCAAACAGGAATTCTGGAAAACAAGATTAAGAAGTGTTTGGTGATGTTTGCTAGAATTGGAGTTGCATGTTCTGAAGAGCTTCCCGCTCATCGAATGATGATAAAAGATGTAGTTAAGTTGAACGAAATAAAATCAAAGCTTCCATGA 2808 0.3668 MRIFMTLLLCFAIQMFVYYMPSATVTLALSSETDKHALLALKEKLTNGEPDSLPSWNESLHFCEWQGVTCGRRHMRVSALHLENQTLGGTLGSSLGNLTFLTRLRLRNVNLHGEIPKQVGRLKRLQVLNLGKNHLQGEISIELTNCTDLSIPYSLGRLSSLNSLSLSLNKLSGEIPHSLYNLSNIQLFDLAENNLFGTLPSNMNLAFPNLKNIYVGQNQIRGTFPSSITNLTELQDFDIASNDFNGPIPLTLGRLNKLEWFNITGNDFGSGGSPDLDFLSSLTNCTQFGKLSDVIGNFSIHLSWLDMGENQIYGVIPDRIGKLIGLTFFSIGNNSVEGTIPNSIGKLKNLAKLVLQENKLSGNIPTSIGNLTLLSELFLGGNKLKGSIPFTLRYCTQLQKLSVANNKLSGDIPNQTFIYLKYLVHLFLLKNSLTGLIPSEFGNMKQLSVLHLSSNKFSGEIPKDLATCLALTELALGGNFLHGVVPSFLGSLRSLNLLDLSNNKLSSIIPFELENLTLLNTLDLSYNNLFGEVPIGGVFSNVSAISMTGNKNLCGGIPQLKLPLCFKASSKKQKRSFKKKLILISVIGGCLISFIALIIVHFFTRKRKMSPSSQSLQNGNLRVTYGEIHEATNGFSLSNLVGTGSFGSVYKGSLLNFERLIAVKVLNLETRGATKSFIAECTALGKLKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKFLHDNEGSENHNLNLTQRLDIALDVAHALNYLHNDVEQAVVHCDIKPSNVLLDDDIVAHLGDFGLSRLILGTTEHSSKDQVISSTIKGTIGYVPPEYGAGVPVSQQGDIYSFRILLLEMLTGKRPTDSMFFENLSLHKFCKMNLSEGILEIVDRSLLMSFVEDQTGILENKIKKCLVMFARIGVACSEELPAHRMMIKDVVKLNEIKSKLP* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1147 935 Gene3D Ribonuclease Inhibitor 275 565 IPR032675 -
Mal8g1147 935 ProSitePatterns Protein kinases ATP-binding region signature. 641 664 IPR017441 GO:0005524
Mal8g1147 935 SMART LRR_typ_2 516 541 IPR003591 -
Mal8g1147 935 SMART LRR_typ_2 347 371 IPR003591 -
Mal8g1147 935 SMART LRR_typ_2 158 182 IPR003591 -
Mal8g1147 935 SMART LRR_typ_2 492 515 IPR003591 -
Mal8g1147 935 SMART LRR_typ_2 122 146 IPR003591 -
Mal8g1147 935 SMART LRR_typ_2 444 468 IPR003591 -
Mal8g1147 935 SMART LRR_sd22_2 516 544 - -
Mal8g1147 935 SMART LRR_sd22_2 347 373 - -
Mal8g1147 935 SMART LRR_sd22_2 207 233 - -
Mal8g1147 935 SMART LRR_sd22_2 158 184 - -
Mal8g1147 935 SMART LRR_sd22_2 492 513 - -
Mal8g1147 935 SUPERFAMILY L domain-like 283 555 - -
Mal8g1147 935 Pfam Leucine rich repeat 397 457 IPR001611 GO:0005515
Mal8g1147 935 Pfam Leucine rich repeat 471 529 IPR001611 GO:0005515
Mal8g1147 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 764 776 IPR008271 GO:0004672|GO:0006468
Mal8g1147 935 Gene3D Transferase(Phosphotransferase) domain 1 717 934 - -
Mal8g1147 935 ProSiteProfiles Protein kinase domain profile. 635 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1147 935 Pfam Protein kinase domain 637 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1147 935 PANTHER LRR RECEPTOR-LIKE KINASE 150 935 - -
Mal8g1147 935 PANTHER LRR RECEPTOR-LIKE KINASE 18 148 - -
Mal8g1147 935 ProSiteProfiles Leucine-rich repeat profile. 494 515 IPR001611 GO:0005515
Mal8g1147 935 SMART serkin_6 635 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1147 935 Gene3D Phosphorylase Kinase; domain 1 599 716 - -
Mal8g1147 935 SUPERFAMILY Protein kinase-like (PK-like) 615 927 IPR011009 -
Mal8g1147 935 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Mal8g1147 935 SUPERFAMILY L domain-like 31 283 - -
Mal8g1147 935 Gene3D Ribonuclease Inhibitor 148 206 IPR032675 -
Mal8g1147 935 Gene3D Ribonuclease Inhibitor 207 274 IPR032675 -
Mal8g1147 935 Gene3D Ribonuclease Inhibitor 33 147 IPR032675 -
Mal8g1147 935 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 150 935 - -
Mal8g1147 935 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 148 - -
Mal8g1147 935 PRINTS Leucine-rich repeat signature 495 508 - -
Mal8g1147 935 PRINTS Leucine-rich repeat signature 516 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1147 Mal-Chr8 17794209 17797499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1147 26 926 Receptor kinase-like Gene Family AT3G47570 40.305 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1147 Pkinase 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1147 - - mtr:MTR_1g029940 1094.34