Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1143 ATGATGACTTTTATGTCAACTATTCTACTTTGCTTTGCTAGCCAAATGTTGATGTATTATTTCATACCATCAGCAACAGTTGCTCTTTCTTTGAGTTCACAGACTGATAAGCTTGCTTTGCTTGCTTTGAAGGAAAAGCTTACAAATGGTGAACCAGATTCTTTGCCATCATGGAACGAGTCTCTACATTTCTGCGAATGGCAGGGGATTAGATGTGGTCGTCGCCACATGAGAGTCTCTGTCTTGCATTTGGAAAATCAAACCAGTTGGGGTGGTACTCTTGGACCATCATTGGGAAATCTAACATTTCTCAAAACACTAATACTTTACAACTTCAACTTGCATGGTGAAATTCCAAAACAAGTTGGTCGTTTGAAACGATTGACATTTCTTGACTTAAGTGTCAACCATCTTCAAGGAGAGATTCCTATAGAGCTCACTAACTGCACAAATCTCAAGGTAATTGATTTTGCATTGAATCAACTTATCACAGGAAGAGTTCCCACATGGTTTGGATCAATGATGCAACTTACTAAATTGCGTCTTGCTCACAATCTTCTAGTTGGTACTATTCCATCTTCCTTAGGAAATGTTTCATCACTCAAAATTCTATCACTTAGAGGCAATCACTTGGAAGGAAGCATACCTTATTCTTTGGGTAGGTTGTCAGGTTTGACATTTCTGTCTCTAGCTTCAAATAATTTGTCGGGTGAAATCCCTCACTCTCTTTACAACCTATCAAATGTTCAAGTTTTTTCTCTCGTGGAAAACAAGTTATTTGGTAGTCTTCCAACAAATATGAATCTTGTTTTTCCCAATCTTGAAGAATTATATGTAGGGTTAAACCAAATAAGCGGAATTTTTCCGTCTTCAATATCCAACCTCACTGGATTGCAAAAGTTTGATATAGCATATAATGCTTTTAATGGGCCAATACCTTTAAATTTGGGTCGATTAAATAAACTTGAAGGGTTTAATATTGGAGGAAATAATTTTGGGAGTGGAGGAGTTCACGATTTGGATTTTCTATCATCTTTAACCAACTGTACCCAGTTGTCAGCTATCTTGGTTTTTGGCAATAAATTTGGTGGTGTGTTACCGAATCTTATAGGAAACTTTTCCACTCATCTTCGTTGGCTTCATATGGAGTTTAATCAAATATATGGAGTGATCCCGGAAAGAATTGGACAACTAATCGGTTTAACCGTCTTAGTCATTGCAAACAATTTCCTTGAGGGAACAATTCCAAATTCAATTGGAAAGCTTAAGAATCTAGGAGTATTGGACTTAGATAATAACAAATTCTTCGGTAACATTCCTATAGTCATTGGCAATCTTAGTGTGTTGTCTGATTTGTATCTATATAGCAATAAATTGGAAGGAAATATTCCAATTTCCATTAGAAATTGTACCCAATTGCAGATATTAGTTTTTACTGGTAACAAATTGAGTGGTGATATTCCCAACCAAACATTTGGCTATATAGAAGGTTTAATAAATCTTGACTTATCCAACAACTCCTTGACTGGTCCCATTCCTTCAGAGTTTGGTAACTTGAAGCATCTTTCTCATTTGTATCTAAGCTTCAATAAGTTGTCTGGTGAAATTCCTAAGGATTTAGCTTCTTGCATAGCACTGACAGAACTAGAGCTGGGTAGAAACTTCTTCCATGGAGCTATACCTATGTTCTTCAGCTCCTCTTTAAGGTCCCTTGAGAAATTAGATCTTTCTGAAAATAAATTTTCGAGTATCTTTAGCAATGTTTCAGCAATTTCACTAACTGGAAACAAGAACCTTTGTGGAGGAATACCTCAATTGAAGCTTCCTGCATGCTTTAAGGCACCCTCTAAAAATCAAAAAAGATCTCTCAAAGTGAAACTTATCATCATTAGTGTAATTAGTGGGGTTTTAATCTCTTTCATAGCTTTTCTAATTGTTTATTTTCTCACGAGAAAGCCCAAAAGGTTGCCTTCTTCACCATCTCTGCAAAATGGGCACTTGAGGGTTACTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGATCAGGAAGCTTTGGCTCAGTTTACAAAGGGTCTCTTCTTAACTTTGAAAGACTTATTGGTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAACAAAGAGTTTCATGGCTGAATGTAAAGCTCTGGGAAAGATGAAACATCGAAATCTTGTCAAGATCCTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGTCAAATGGGAGTCTTGAAAAGTTTTTGCACGATAATGAAGGGTCTGAAAATCATAATCTCAACCTCACACAAAGGTTAAACATTGCTCTTGATATGGCTCATGCACTTGATTATCTTCACAATGATACAGAGCAAGCCGTGGTTCACTGTGATATTAAGCCGAACAATGTTCTTCTTGACGATGACATTGTGGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATACTTGGAACCACAGAGCATTCAAGTAAAGATCAAGTCATTTCCTCTACAATAAAAGGAACTATAGGATATATTCCTCCGGAGTACGGAGCAGGTGTTCCAGTATCACCACAGGGAGATATCTACAGCTTTGGGATTCTTCTGTTAGAGATGCTCACCGGAAAGAGACCAACTGATAGTATGTTTTTTGAGAGTCTAAGTCTACATGAACTCTGTAAGATGAAAATTCCCGACGGAATCCTTGAGATAGTGGACCAACGTTTGCTTATGCCATTTGTTGAAGATCAGACAGGGATTGTGGAAAACAAGATTAAAAAGTGTTTGGTGATGTTTGCTAGAATTGGAGTTGCATGTTCTGAAGAGTTTCCTGCTCATCGAATGGGGATAAGAGATGTTATAGTTAAGTTGAATGAAATCAAATCAAAGTTTCCATCCTAG 2952 0.3726 MMTFMSTILLCFASQMLMYYFIPSATVALSLSSQTDKLALLALKEKLTNGEPDSLPSWNESLHFCEWQGIRCGRRHMRVSVLHLENQTSWGGTLGPSLGNLTFLKTLILYNFNLHGEIPKQVGRLKRLTFLDLSVNHLQGEIPIELTNCTNLKVIDFALNQLITGRVPTWFGSMMQLTKLRLAHNLLVGTIPSSLGNVSSLKILSLRGNHLEGSIPYSLGRLSGLTFLSLASNNLSGEIPHSLYNLSNVQVFSLVENKLFGSLPTNMNLVFPNLEELYVGLNQISGIFPSSISNLTGLQKFDIAYNAFNGPIPLNLGRLNKLEGFNIGGNNFGSGGVHDLDFLSSLTNCTQLSAILVFGNKFGGVLPNLIGNFSTHLRWLHMEFNQIYGVIPERIGQLIGLTVLVIANNFLEGTIPNSIGKLKNLGVLDLDNNKFFGNIPIVIGNLSVLSDLYLYSNKLEGNIPISIRNCTQLQILVFTGNKLSGDIPNQTFGYIEGLINLDLSNNSLTGPIPSEFGNLKHLSHLYLSFNKLSGEIPKDLASCIALTELELGRNFFHGAIPMFFSSSLRSLEKLDLSENKFSSIFSNVSAISLTGNKNLCGGIPQLKLPACFKAPSKNQKRSLKVKLIIISVISGVLISFIAFLIVYFLTRKPKRLPSSPSLQNGHLRVTYGELHEATNGFSSSNLVGSGSFGSVYKGSLLNFERLIGVKVLNLETRGATKSFMAECKALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMSNGSLEKFLHDNEGSENHNLNLTQRLNIALDMAHALDYLHNDTEQAVVHCDIKPNNVLLDDDIVAHLGDFGLARLILGTTEHSSKDQVISSTIKGTIGYIPPEYGAGVPVSPQGDIYSFGILLLEMLTGKRPTDSMFFESLSLHELCKMKIPDGILEIVDQRLLMPFVEDQTGIVENKIKKCLVMFARIGVACSEEFPAHRMGIRDVIVKLNEIKSKFPS* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1143 983 Gene3D Ribonuclease Inhibitor 199 342 IPR032675 -
Mal8g1143 983 Gene3D Ribonuclease Inhibitor 343 612 IPR032675 -
Mal8g1143 983 SMART LRR_typ_2 519 543 IPR003591 -
Mal8g1143 983 SMART LRR_typ_2 422 446 IPR003591 -
Mal8g1143 983 SMART LRR_typ_2 125 149 IPR003591 -
Mal8g1143 983 SMART LRR_typ_2 198 221 IPR003591 -
Mal8g1143 983 SMART LRR_typ_2 222 246 IPR003591 -
Mal8g1143 983 SMART LRR_typ_2 568 591 IPR003591 -
Mal8g1143 983 SMART LRR_typ_2 271 294 IPR003591 -
Mal8g1143 983 SUPERFAMILY Protein kinase-like (PK-like) 655 972 IPR011009 -
Mal8g1143 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 584 982 - -
Mal8g1143 983 PRINTS Leucine-rich repeat signature 498 511 - -
Mal8g1143 983 PRINTS Leucine-rich repeat signature 568 581 - -
Mal8g1143 983 ProSiteProfiles Protein kinase domain profile. 681 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1143 983 Gene3D Phosphorylase Kinase; domain 1 648 762 - -
Mal8g1143 983 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Mal8g1143 983 PANTHER LRR RECEPTOR-LIKE KINASE 20 584 - -
Mal8g1143 983 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Mal8g1143 983 SUPERFAMILY L domain-like 33 332 - -
Mal8g1143 983 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Mal8g1143 983 Pfam Leucine rich repeat 486 532 IPR001611 GO:0005515
Mal8g1143 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 584 - -
Mal8g1143 983 Gene3D Transferase(Phosphotransferase) domain 1 763 982 - -
Mal8g1143 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Mal8g1143 983 Pfam Protein kinase domain 683 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1143 983 PANTHER LRR RECEPTOR-LIKE KINASE 584 982 - -
Mal8g1143 983 SUPERFAMILY L domain-like 347 601 - -
Mal8g1143 983 SMART serkin_6 681 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1143 983 SMART LRR_sd22_2 519 542 - -
Mal8g1143 983 SMART LRR_sd22_2 222 248 - -
Mal8g1143 983 SMART LRR_sd22_2 271 297 - -
Mal8g1143 983 SMART LRR_sd22_2 568 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1143 Mal-Chr8 17677451 17680602 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1143 32 981 Receptor kinase-like Gene Family AT3G47570 41.414 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1143 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1143 - - mtr:MTR_1g029940 1387.86