Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1141 ATGAAACATCGAAATCTTGTCAAGATCCTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCATAATGGAAGTTTAGAAAAGTTGTTGCATGATAATGAAGGGTCTGAAAATCATAATCTCAACCTCACACAAAGGTTAGACATTGCTCTTGATATGGCTCATGCACTTGATTATCTTCACAATGATACAGAGCAAGCCGTGGTTCACTGTGATATTAAGCCGAGCAATGTTCTTCTTGATGATGACATTGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCTTGGAACCACAGAGCATTCAAGTAAAGATCAAGTTCTTTCCTCTACAATAAAAGGAACTATAGGATATATTCCTCCAGAGTACGGAGCAGGTGTTCCAGTATCACCACAGGGAGATATCTACAGCTTTGGGATTCTTCTGTTAGAGATGCTCACCGGAAAGAGACCAACTGATAGTATGTTTTTTGAGAGTCTAAGTCTACATGAACTCTGTAAGATGAAAATTCCCGACGGAATCCTTGAGATAGTGGACCAACGTTTGCTTATGCCATTTGTTGAAGATCAGACAGGGATTGTGGAAAACAAGATTAAAAAGTGTTTGGTGATGTTTGCTAGAATTGGAGTTGCATGTTCTGAAGAGTTTCCTGCTCATCGAATGGGGATAAGAGATGTTATTGTTAAGTTGAATGAAATCAAATCAAAGTTTCCATGA 753 0.3851 MKHRNLVKILTCCSSVDYNGEDFKAIVFEFMHNGSLEKLLHDNEGSENHNLNLTQRLDIALDMAHALDYLHNDTEQAVVHCDIKPSNVLLDDDIVAHLGDFGLARLILGTTEHSSKDQVLSSTIKGTIGYIPPEYGAGVPVSPQGDIYSFGILLLEMLTGKRPTDSMFFESLSLHELCKMKIPDGILEIVDQRLLMPFVEDQTGIVENKIKKCLVMFARIGVACSEEFPAHRMGIRDVIVKLNEIKSKFP* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1141 250 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1141 250 Gene3D Transferase(Phosphotransferase) domain 1 31 249 - -
Mal8g1141 250 SMART serkin_6 2 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1141 250 SUPERFAMILY Protein kinase-like (PK-like) 2 240 IPR011009 -
Mal8g1141 250 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 250 - -
Mal8g1141 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Mal8g1141 250 Pfam Protein kinase domain 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1141 250 PANTHER LRR RECEPTOR-LIKE KINASE 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1141 Mal-Chr8 17610442 17611354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1141 1 249 Receptor kinase-like Gene Family AT3G47570 47.826 7.79e-74 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1141 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1141 - - mtr:MTR_7g078340 437.573