Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1139 ATGAGGACTTTTATGTCGATATTTTTTCTTTGCTTTGCTAGCCAAATCTTGGTGTATTATTTCCTTTCATCAACAACTACTGTTGCTCTTGCTTTGAGTTCACAGACTGATAAGCTTTCTTTGCTTGCTTTGAAAGAAAAGCTTACAAATGGTATGTCTGATTCTCTGCCATCATGGAATGAGTCTCTACATTTTTGTGAATGGCAGGGGGTTACATGCGGTCGTCGTCACATGAGAGTCTCTATCTTGTATTTGGAGAATCAAAAATTGGATGGTACTCTTGGACCATCCTTGGGAAATCTAACATTTCTTAGAAAAATCTACCTTTCAAATGTCGACTTGCATGGTGAAATTCCAAAAGAAATTGGTCGTTTGAAGAGGTTGCAAGTTCTTCACTTAACCAACAACAGCAAACTTCAAGGAGAGATTCCTATTGAGCTCACTAATTGCACAAATATCAAAGTAATTAATCTGGGCTACAATCAACTCAATGGAAGAATTCCGACAAGGTTTGGTTCAATGATGCAACTTATTGAATTGAAACTCCGTGGCAATAATCTCATTGGTACTATCCCATCTTCCCTAGGAAATGTTTCATCACTCCAATGGCTATCACTTACAGAAAATCACTTGGAAGGAAGCATACCTTATTCTTTGGAAGGTGTCTTTGGCAATGTCTCAGCAATTTCATTATCTGGTAACAAAAACCTTTGTGGAGGAATACCTCAATTGAAGCTTCCCTTGTGCTTTAAGCCCCCCTCCAAGAAACACAAAAGATCTCTCAAAATAAAACTTATCCTTATCAGTGTAATTGGTGGGGTTTTGATCTCTTTCATAGCTTTTATAATTTTCTATTTTATTTCAAGAAAGACCAAAATGTTACCTTCTTCACCATCTTTGCAAAAAGGGAATTTGATGATTACTTATGGAGAGATACATGAAGCAACCAATGGGTTTTCTTCATCCAATTTAGTTGGAACAGGAAGTTTTGGTTCTGTTTACAAAGGATCTCTTCTCAACTTTGAAAAACCCATAGTTGTAAAGGTATTGAATCTTAAAACACGTGGAGGAGCAAAGAGTTTCAAAGCAGAATGCGAAGCTCTAGGAAAGATGAAGCACCGAAATCTTGTCAAGATCCTAACTTGTTGTTCAAGTGTTGATTATAAGGGTGATGATTTCAAGGCTATCGTTTTTGAGTTCATGCCTAATGGAAGTCTAGAAAAGATATTGCATGATAATGATGGCTCTGGAAATCATAATCTTAGCCTCAAACAAATGGTTGACATTGCTCTTGATGTAGCTCATGCACTTGATTACCTTCACAATGATACAGAGCATGTTGTAGTTCATTGTGATGTTAAACCAAGCAATGTTCTTCTTGATGATTACATGGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCATGGAGCTACAAATCATTCAAGTAAAGATCAAGTTAATTCCTCGACAATTAAGGGAACTATAGGATATGTTCCTCCTGAATATGGAGCAGGTGGTCCGGTATCACCACATGGAGATATTTATAGCTATGGGATTCTTCTGTTAGAGATGCTCTCTGGAAAGAGACCAACGGATAACATGTTTTGCGAGAATTTAAGCCTTCACGAATTCTGTAAGATGAAAATTCCCGTAGAAATTCTTGAGATAGTGGATTCACATTTGCTTTTGCCATTTCGTAAAGATCAGACACGAGTGATGGAAAACAACATAAAGGAGTGTCTAGTGATGTTTGCTAAAATCGGAGTTGCATGTTCTGAAGAATTCCCTACTCAGCGAATGCTCACAAAAGATGTTATAGTGAAGTTGCTTGAAATTAAGAAGTTATTCTGCTAA 1863 0.3736 MRTFMSIFFLCFASQILVYYFLSSTTTVALALSSQTDKLSLLALKEKLTNGMSDSLPSWNESLHFCEWQGVTCGRRHMRVSILYLENQKLDGTLGPSLGNLTFLRKIYLSNVDLHGEIPKEIGRLKRLQVLHLTNNSKLQGEIPIELTNCTNIKVINLGYNQLNGRIPTRFGSMMQLIELKLRGNNLIGTIPSSLGNVSSLQWLSLTENHLEGSIPYSLEGVFGNVSAISLSGNKNLCGGIPQLKLPLCFKPPSKKHKRSLKIKLILISVIGGVLISFIAFIIFYFISRKTKMLPSSPSLQKGNLMITYGEIHEATNGFSSSNLVGTGSFGSVYKGSLLNFEKPIVVKVLNLKTRGGAKSFKAECEALGKMKHRNLVKILTCCSSVDYKGDDFKAIVFEFMPNGSLEKILHDNDGSGNHNLSLKQMVDIALDVAHALDYLHNDTEHVVVHCDVKPSNVLLDDYMVAHLGDFGLARLIHGATNHSSKDQVNSSTIKGTIGYVPPEYGAGGPVSPHGDIYSYGILLLEMLSGKRPTDNMFCENLSLHEFCKMKIPVEILEIVDSHLLLPFRKDQTRVMENNIKECLVMFAKIGVACSEEFPTQRMLTKDVIVKLLEIKKLFC* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1139 620 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Mal8g1139 620 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Mal8g1139 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Mal8g1139 620 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 24 219 - -
Mal8g1139 620 PANTHER LRR RECEPTOR-LIKE KINASE 220 617 - -
Mal8g1139 620 ProSitePatterns Protein kinases ATP-binding region signature. 325 348 IPR017441 GO:0005524
Mal8g1139 620 SUPERFAMILY L domain-like 35 242 - -
Mal8g1139 620 SMART serkin_6 319 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1139 620 SUPERFAMILY Protein kinase-like (PK-like) 299 611 IPR011009 -
Mal8g1139 620 Pfam Protein kinase domain 321 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1139 620 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 220 617 - -
Mal8g1139 620 ProSiteProfiles Protein kinase domain profile. 319 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1139 620 Gene3D Ribonuclease Inhibitor 34 136 IPR032675 -
Mal8g1139 620 Gene3D Ribonuclease Inhibitor 137 247 IPR032675 -
Mal8g1139 620 Gene3D Transferase(Phosphotransferase) domain 1 401 618 - -
Mal8g1139 620 PANTHER LRR RECEPTOR-LIKE KINASE 24 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1139 Mal-Chr8 17555203 17558445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1139 83 619 Receptor kinase-like Gene Family AT3G47570 41.818 5.05e-133 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1139 Pkinase 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1139 - - mtr:MTR_1g029940 668.692