Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1137 ATGAGAATTTTCATGACGTTACTTCTCTGCTTTGCTAGCCAAATGTTCGTGTATTACATGCCGTCAGCTACTGTTACTCTTGCTTTGAGTTCAGACACTGATAAGCATGCTTTGCTTGCTTTGAAGGAAAAGCTTACAAATGGTGAACCAGATTCTTTGCCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGGATTAGATGTGGTCGTCGCCACAAGAGAGTCTCTGTCTTGCATTTGGAAAATCAAACCAGTTGGGGTGGTACTCTTGGACAATCATTGGGAAATCTAACATTTCTCAGAGTACTTATACTTAAAAACGTCAACTTGCATGGTGAAATTCCAAAACAAGTTGGTCGTTTGAGGCGATTGCAAGTTCTTAACTTAGGAATCAACCATCTTCAAGGAGAGATTCCTATAGAGCTCACTAACTGCACAAATATCAAGGTAATTGATTTTTCCTTCAATCAACTGATCACAGGAAGAGTTCCCACATGGTTTGGATCAATGATGCAACTTACTAAATTGCGTCTTGCTCACAATCATCTAGTTGGTACTATTCCATCTTCCTTAGGAAATGTTTCATCGCTCAAAATGCTATCACTTATGGGCAATCACTTGGAAGGAAGCATACCTTATTCTTTGGGTAGGTTGACAGGTTTGACATGGCTATCTCTAAGTTCAAATAATTTGTCAGGTGAAATCCCTAACTCTCTTTACAACCTATCAAATATTAAAATATTTGATATTGGGGGAAATGAGTTATTCGGTAGTCTCCCAACTAATATAAATCTTGCTTTTCCCAATCTTGAAGAATTATATGTAGGAGGGAACCAAATAAGCGGAACTTTTCCGTCTTCAATATCCAACCTCACTGGATTGCAAATGTTTGATATAGCATATAATACTTTTAATGGGCCAATACCTTTAAATTTGGGTCGATTAAATAAACTTGAGTGGTTTAATATTGGAGGAAATGATTTTGGGAGTGGAGGAGTTCACGATTTGGATTTTCTTTCATCGTTAACCAACTGTACCCAATTGTCAGTGATCTTTGCTTTTGACAATAATTTTGGTTGTGTGTTGCCGAATCTTATAGGAAACTTTTCCACTCATCTTCGTGTGCTTCATATGGAGTTTAATCAAATATATGGAGTGATCCCGGAAAGAATTGGACAACTAATCGGTTTAACTGTCTTAAATATTGATAACAATTTCTTTGAGGGAACAATTCCAGATTCAATTGGAAAGCTTAAGAATCTAGGAGTATTGGGCTTGGGTAGTAACAAATTCTATGGTAACATTCCTATAGTCATTGGCAATCTTACTGTGTTGTCTAGGCTATATCTATATAGAAATCAATTGGAAGGGAATATTCCAATTTCCATTAGAAATTGCACCCAATTGCAGAGATTAGTTTTTGCTGTTAACAAATTGAGTGGTGATATTCCCAACCAAACATTTGGCTATATAGAAGGTTTAATAAATCTTGACTTATCCAACAACTCCTTGACTGGTCCCATTCCTTCAGAGTTTGGTAACTTGAAGCATCTTTCACAATTGAATCTAAGCTTGAATAAGTTGTCTGGTGAAATTCCTAAGGATTTAGCTTCTTGCATAGCACTAACAGAACTAGAGCTGGGTAGAAACTTCTTCCATGGAGCTATACCTTTGTTCTTCAGCTCCTCTTTAAGGTCCCTTGAGAAATTAGATCTTTCTGAAAATAAATTTTCAAGCATAATCCCCTCTGAACTAGCAAATCTAACATTTTTGAATGCTTTGAACTTGTCTTTTAACAATCTCTATGGTGAGGTTCCCACAGGAGGTATCTTTAGCAATGTTTCAGCAATTTCAATAACTGGAAACAAGAACCTTTGTGGAGGAATACCTCAATTGAAGCTTCATGCATGCTTTAAGGAGCAATCAAAGAAACACAAAAGATCACTCGAAAAGAAACTTATCATCATCTGTGTAATTGGTTTGGGTTTGATCTCTTTCATAGCATTTATAATTGTCCATTTTCTGAAGAGAAAGCCTAAAAGGTTACCTTCTTCGCCATTTTTGATAAATGGGAGCTTGAGGGTTTCTTATGGAGAGCTACATGAAGCAACCGATGGATTTTCTTCATCCAATTTGGTAGGATCAGGAAGCTTTGGCTCTGTTTACAAAGGGTCTCTTCTTTATTTTGAAAGACCTATTGTTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAGCAAAGAGTTTCATGGCGGAATGCAATGCTCTAGGAAAGATGAAGCACCGAAATCTTGTTAAGATCCTAACTTGTTGTTCAAGTGTCGATTATAAAGGTAAAGAGTTTAAGGCTATTGTTTTTGAGTTCATGCCAAACGGGAGTCTAGAAAAGATTTTGCACGACAATGAAGGATCTGAAAGCCATAATCTCAACCTCACACAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACAATGATACAGAGCAAGTTGTAGTTCACTGTGATATTAAGCCGAGCAACGTTCTTCTCGACGATGACATTGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTTGTTCTTGGTACCTCAGATCATTCAAGTAAATATCAAATTACTTCCTCCACAATCAAGGGAACTATAGGATATGTTCCTCCTGAATACGGAGCAGGTGTTCCAATATCACCAGAGGGAGATATCTACAGCTTTGGGATTCTTTTGTTAGAGATGCTCACCGGAAAGAGACCAACTGATAACATGTTTAATGAGAATCTAAGTCTACACAAATTCTGTAAGATGAAGATTCCAGAAGGAATTCTTGAGATAGTGGATTCCCGTTGGCTTATGCCATTTGCTGAAGATCAAAAAGGGATTGTGGAAAACAGGATTAAGAATTGTTTGGTGATGTTTGCGAGAATTGGAGTTGCATGTTCTGAACAGTTTCCTGCTCATCGAATGCTGATAAAAGATGCTATAGTTAAGTTGAATGAAATCAAATCGAAGTTTCCATGA 3033 0.3752 MRIFMTLLLCFASQMFVYYMPSATVTLALSSDTDKHALLALKEKLTNGEPDSLPSWNESLHFCEWQGIRCGRRHKRVSVLHLENQTSWGGTLGQSLGNLTFLRVLILKNVNLHGEIPKQVGRLRRLQVLNLGINHLQGEIPIELTNCTNIKVIDFSFNQLITGRVPTWFGSMMQLTKLRLAHNHLVGTIPSSLGNVSSLKMLSLMGNHLEGSIPYSLGRLTGLTWLSLSSNNLSGEIPNSLYNLSNIKIFDIGGNELFGSLPTNINLAFPNLEELYVGGNQISGTFPSSISNLTGLQMFDIAYNTFNGPIPLNLGRLNKLEWFNIGGNDFGSGGVHDLDFLSSLTNCTQLSVIFAFDNNFGCVLPNLIGNFSTHLRVLHMEFNQIYGVIPERIGQLIGLTVLNIDNNFFEGTIPDSIGKLKNLGVLGLGSNKFYGNIPIVIGNLTVLSRLYLYRNQLEGNIPISIRNCTQLQRLVFAVNKLSGDIPNQTFGYIEGLINLDLSNNSLTGPIPSEFGNLKHLSQLNLSLNKLSGEIPKDLASCIALTELELGRNFFHGAIPLFFSSSLRSLEKLDLSENKFSSIIPSELANLTFLNALNLSFNNLYGEVPTGGIFSNVSAISITGNKNLCGGIPQLKLHACFKEQSKKHKRSLEKKLIIICVIGLGLISFIAFIIVHFLKRKPKRLPSSPFLINGSLRVSYGELHEATDGFSSSNLVGSGSFGSVYKGSLLYFERPIVVKVLNLETRGAAKSFMAECNALGKMKHRNLVKILTCCSSVDYKGKEFKAIVFEFMPNGSLEKILHDNEGSESHNLNLTQRVDIALDVAHALDYLHNDTEQVVVHCDIKPSNVLLDDDIVAHLGDFGLARLVLGTSDHSSKYQITSSTIKGTIGYVPPEYGAGVPISPEGDIYSFGILLLEMLTGKRPTDNMFNENLSLHKFCKMKIPEGILEIVDSRWLMPFAEDQKGIVENRIKNCLVMFARIGVACSEQFPAHRMLIKDAIVKLNEIKSKFP* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1137 1010 SMART serkin_6 709 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1137 1010 Gene3D Ribonuclease Inhibitor 30 314 IPR032675 -
Mal8g1137 1010 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Mal8g1137 1010 SMART LRR_typ_2 172 196 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 269 293 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 517 541 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 444 468 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 590 615 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 220 244 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 123 147 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 566 589 IPR003591 -
Mal8g1137 1010 SMART LRR_typ_2 396 420 IPR003591 -
Mal8g1137 1010 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Mal8g1137 1010 PRINTS Leucine-rich repeat signature 566 579 - -
Mal8g1137 1010 PRINTS Leucine-rich repeat signature 496 509 - -
Mal8g1137 1010 PANTHER LRR RECEPTOR-LIKE KINASE 18 1010 - -
Mal8g1137 1010 Gene3D Transferase(Phosphotransferase) domain 1 791 1009 - -
Mal8g1137 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 1010 - -
Mal8g1137 1010 ProSiteProfiles Protein kinase domain profile. 709 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1137 1010 Gene3D Ribonuclease Inhibitor 335 648 IPR032675 -
Mal8g1137 1010 ProSiteProfiles Leucine-rich repeat profile. 568 591 IPR001611 GO:0005515
Mal8g1137 1010 SUPERFAMILY Protein kinase-like (PK-like) 683 998 IPR011009 -
Mal8g1137 1010 Pfam Leucine Rich Repeat 496 517 IPR001611 GO:0005515
Mal8g1137 1010 Pfam Leucine Rich Repeat 399 420 IPR001611 GO:0005515
Mal8g1137 1010 SUPERFAMILY L domain-like 346 629 - -
Mal8g1137 1010 Pfam Protein kinase domain 711 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1137 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Mal8g1137 1010 Gene3D Phosphorylase Kinase; domain 1 675 790 - -
Mal8g1137 1010 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Mal8g1137 1010 Pfam Leucine rich repeat 270 330 IPR001611 GO:0005515
Mal8g1137 1010 SUPERFAMILY L domain-like 32 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1137 Mal-Chr8 17536755 17540021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1137 26 1009 Receptor kinase-like Gene Family AT3G47570 43.373 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1137 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1137 - - mtr:MTR_1g029940 1409.82