Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1136 ATGATGTTTCTTTTCTGCTTTGCTAGCCAAATGTTGATGTATTGTTTCATACCATCAGCAATTGCTGCTCTTTCTTTGAGTTCACAGAATGATAAGCTTGCTTTGCTTGCTTTGAAGGAAAAGCTTACAAATGGTGAACCAGATCCTTTGCCATCATGGAACGAGTCTCTTCATTTCTGCGAATGGCAGGGGATTAGATGTAGTCGTCGCCACATGAGAGTCTCTGTCTTGCATTTGGAAAATCAAACCAGTTGGGGTGGTACTCTTGGACCATCATTGGGAAATCTAACATTTCTCAGAATACTTAAACTTAAAAATGTCGGCTTGCATGGTGAAATTCCAAAACAAGTTGGCCGTTTGAAGCGATTGCAAATTCTTAACTTAAGTAACAACAAACTTCAAGGAGAGATTCCTATAGAGCTCTCTAACTGCACAAATATCAAGGTAATTCATTTGCTACAAAATCAACTCACAGGAAGAGTTCCTAAATGGTTTGGATCAATGATGCAACTTACTAGATTGGGTCTCGAGTCAAATAATCTAGTTGGTACTATTCCATCTTCCTTGAAAAATGTTTCATCACTCCAAATGCTAACACTTACAGAAAATCACTTGCAAGGAAGCATACCTTTTTCATTGGGTAAGCTGTCAAGTTTGATACTATTGTATCTAGCTTCAAATAATTTATCAGGTGAAATCCCGCATTCTCTTTACAACCTATCCAATATTCAATATTTTGATCTTGGGGAAAACGAGTTATTTGGTAGGCTTCCTTCAAATATGAATCTTATTTTTCCAAATCTTGTAGAACTCTTGGTAGGATCCAACCAAATAACCGGGAATTTTCCGTCTTCAATATCCAACCTCACTGAATTGGAAAAAATTGATATAGGAGAGAATTCTTTTAGTGGGTCAATACCTATTACTTTGGGCCGATTAAAAAAACTTGATTTTTTTCTTATTGGCATAAATAATTTTGGGCGTGGAATGACTCATGATTTGGACTTTCTTTCTTCGTTAACCAACTGCACTCAATTGTCAATACTCGTTTTTCATAAAAATAGGTTTGGTTGTGAATTGCCGGATCTCATAGGAAACTTTTCCACCCATCTTAGTTGGCTTGATATGGGGTATAATCAAATATATGGAGTGATACCTGAAACAATTGGAAAACTTATCGATTTAACTTACTTAGGCTTTGGAAACAATTTATTTGAGGGAACAATTCCAGATTCAATTGGAAAGCTTAAGAATCTAGTAATATTGGTCTTTCAAGAAAACAAATTATTTGGTAGTATTCCAACAAGTATTGGAAATCTTACTAACTTGTCTGAGTTATATTTGCTTGCCAATAAATTGGAAGGAAGCATTCCGTCAAACCTGAGATATTGCACCCAATTGCAGAAATTAAGTATTTGCGATAACAAATTGAGTGGTGTTATACCGAATCAAACATTTGGCTATCTAAAAGGTTTAATAAATTTGTACTTATGCAACAACTCATTGACTGGTCCCATTCCTTCGGAGTTTGGTAACTTGAAGCATCTTTCAAAATTGTATCTAAACTCAAATAAGTTGTCTGGTGAAATTCCAAAGGATCTTGTTGCTTGTTTGTTATTGACAAACCTTGTGTTGTGGGGAAACTTTTTCCATGGAGAAATACCTTCATTCTTGGGCTCTTTAAGATCCCTAGAAATTTTAGATGTTTCTAACAACAACTTCTCAGGGACAATCCCCTTTGAACTAGAAAATCTTACATATTTGAATAATTTGAACTTGTCTTTTAACAATTTAAATGGTGAGGTTCCCATAGGAGGCATCTTTATCAATGTCTCAGTAGTTTCACTAACCGGAAACAAGAACATTTGTGGAGGAATACCTCAATTGAAGCTTCCTCCATGTTTTAAGGTGCCAAAGAAACACAAAAGATATCTCAAAAAGAAACTTATCATCATTAGTGTAATTGGTGGGGTTTTAATCTCTTTCATAGCTTTTCTAATTGTCCATTTTTTCACTAGAAAGCCCAAAAGGTTAGCTTCTTCACCATCTCTACAAAATGGGCCGTTGAGGGTTACTTATGGAGAGTTGTATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGAACCGGAAGCTTTGGCTCTGTTTACAAAGGGTCTCTTCTTTATTTTGAAAGACCTATTGTTGTAAAGGTGTTGAATCTTGAAGCAAGTGGAGCATCAAAGAGTTTCTTGGCTGAATGTAAAGCTTTGGGAAAGATGAAGCATCGGAATCTTGTCAAGATCCTAACTTGCTGTTCAAGTGTTGATTATAATGGTGAAGACTTCAAGGCTATAGTTTTTGAGTTCATGCCTAATGGGAGTTTAGAAAAGTTGTTGCATGATAATGAAGGATCTGAAAATCAAAATCTCAGTTTCACACAAAGGGTAGATGTTGCTCTTGATGTATCTCATGCACTTGATTATCTTCACAATAATACAGAGCAAGCCGTAGTTCACTGTGATATTAAGCCGAGTAACGTTCTTCTTGACGATGACATTGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCTTGGAACCACAGAGCATTCAAGTAAAGATCAAGTTCTTTCCTCTACAATTAAAGGAACTATAGGATATATTCCTCCTGAGTATGGAGCAGGTGGTCTGGTATCAGCAGAGGGAGATATCTACAGCTATGGGATTCTGCTGTTGGAAATGCTTACTGGAAAGAGACCAACAGATAGCATGTTTTGTGAGAATCTAAGTCTACACAAATTCTGTAAGATGAAAATTCCAGAAGGAATTCTTGAGATTGTGGATTCCTATTGGCTTATTCCATTTGCTCAAAACCAGTCACAGGTTGCGGAAAACAACATAAAGGAGTGTCTAGTGATGTTTGCTAAAATAGGAATTGCATGTTCTGAAGAATTTCCTACTCAGCGAATGCTCATAAAAGATGTTATAGTGAAGTTGCTTGAAATAAAACAGAAGTTATCATTCTAA 3018 0.3628 MMFLFCFASQMLMYCFIPSAIAALSLSSQNDKLALLALKEKLTNGEPDPLPSWNESLHFCEWQGIRCSRRHMRVSVLHLENQTSWGGTLGPSLGNLTFLRILKLKNVGLHGEIPKQVGRLKRLQILNLSNNKLQGEIPIELSNCTNIKVIHLLQNQLTGRVPKWFGSMMQLTRLGLESNNLVGTIPSSLKNVSSLQMLTLTENHLQGSIPFSLGKLSSLILLYLASNNLSGEIPHSLYNLSNIQYFDLGENELFGRLPSNMNLIFPNLVELLVGSNQITGNFPSSISNLTELEKIDIGENSFSGSIPITLGRLKKLDFFLIGINNFGRGMTHDLDFLSSLTNCTQLSILVFHKNRFGCELPDLIGNFSTHLSWLDMGYNQIYGVIPETIGKLIDLTYLGFGNNLFEGTIPDSIGKLKNLVILVFQENKLFGSIPTSIGNLTNLSELYLLANKLEGSIPSNLRYCTQLQKLSICDNKLSGVIPNQTFGYLKGLINLYLCNNSLTGPIPSEFGNLKHLSKLYLNSNKLSGEIPKDLVACLLLTNLVLWGNFFHGEIPSFLGSLRSLEILDVSNNNFSGTIPFELENLTYLNNLNLSFNNLNGEVPIGGIFINVSVVSLTGNKNICGGIPQLKLPPCFKVPKKHKRYLKKKLIIISVIGGVLISFIAFLIVHFFTRKPKRLASSPSLQNGPLRVTYGELYEATNGFSSSNLVGTGSFGSVYKGSLLYFERPIVVKVLNLEASGASKSFLAECKALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMPNGSLEKLLHDNEGSENQNLSFTQRVDVALDVSHALDYLHNNTEQAVVHCDIKPSNVLLDDDIVAHLGDFGLARLILGTTEHSSKDQVLSSTIKGTIGYIPPEYGAGGLVSAEGDIYSYGILLLEMLTGKRPTDSMFCENLSLHKFCKMKIPEGILEIVDSYWLIPFAQNQSQVAENNIKECLVMFAKIGIACSEEFPTQRMLIKDVIVKLLEIKQKLSF* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1136 1005 SMART serkin_6 703 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1136 1005 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Mal8g1136 1005 SUPERFAMILY Protein kinase-like (PK-like) 678 996 IPR011009 -
Mal8g1136 1005 Gene3D Ribonuclease Inhibitor 27 188 IPR032675 -
Mal8g1136 1005 SUPERFAMILY L domain-like 28 281 - -
Mal8g1136 1005 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 1004 - -
Mal8g1136 1005 Gene3D Ribonuclease Inhibitor 333 642 IPR032675 -
Mal8g1136 1005 SMART LRR_typ_2 216 240 IPR003591 -
Mal8g1136 1005 SMART LRR_typ_2 120 144 IPR003591 -
Mal8g1136 1005 SMART LRR_typ_2 513 537 IPR003591 -
Mal8g1136 1005 SMART LRR_typ_2 440 464 IPR003591 -
Mal8g1136 1005 SMART LRR_typ_2 561 585 IPR003591 -
Mal8g1136 1005 Gene3D Phosphorylase Kinase; domain 1 669 784 - -
Mal8g1136 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Mal8g1136 1005 ProSiteProfiles Protein kinase domain profile. 703 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1136 1005 SUPERFAMILY L domain-like 265 367 - -
Mal8g1136 1005 Pfam Protein kinase domain 705 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1136 1005 SUPERFAMILY L domain-like 369 624 - -
Mal8g1136 1005 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mal8g1136 1005 Gene3D Ribonuclease Inhibitor 191 263 IPR032675 -
Mal8g1136 1005 Gene3D Ribonuclease Inhibitor 264 332 IPR032675 -
Mal8g1136 1005 Gene3D Transferase(Phosphotransferase) domain 1 785 1004 - -
Mal8g1136 1005 Pfam Leucine rich repeat 466 526 IPR001611 GO:0005515
Mal8g1136 1005 PANTHER LRR RECEPTOR-LIKE KINASE 15 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1136 Mal-Chr8 17469300 17472555 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1136 27 1002 Receptor kinase-like Gene Family AT3G47570 43.175 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1136 Pkinase 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1136 - - mtr:MTR_1g029940 1262.67