Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1135 ATGAGATTTTTTATGACATTACTTCTCTGCTTTGCTTTCCAAATGTTTGTGTATTGGATGCTGTCAGCTACTCTAACTCTTGCTTTGAGTTCAGAGACTGATAAGCATGCTTTGCTTGATTTGAAGGAAAAGCTTACAAATGGTGAACCAGTTACATGTGGTCGTCGTCACATGAGAGTCTCTGCGTTGCATTTGGAAAATCAAACCAGTTGGGGTGGTACTCTTGGACCATCATTGGGAAATCTAACATTTCTCAGAATACTTATACTTAAAAACGTCAACTTGCATGGTGAAATTCCAAAACAAGTTGGTCGTTTGAAACGATTGCAAGTTCTTGACTTAAGAACCAACCATCTTCAAGGAGAGATTCCTATAGAGCTCACTAACTGCACAAATATCAAGGTAATTGATTTTTCCTTCAATCAATTGATCACAGGAAGAGTTCCCACATGGTTTGGATCAATGATGCAACTTACTAAATTGCGTCTTGCTCACAATCATCTAGTTGGTACTATTCCATCTTCCTTAGGAAATGTTTCATCACTCAAAATGCTATCACTTAGTGGCAATCACTTGGAAGGAAGCATACCTTATTCTTTGGGTAGGTTGTCAGGTTTGACTATTATATTTCTAAGTTTAAATAATTTGTCAGGTGAAATCCCTCACTCTCTTTACAACCTATCAAATGTTCAAGTTTTTTCTCTCGCGGAAAACAAGTTATTTGGTAGTCTTCCAACAAGTATGAATCTTGTTTTTCCCAATCTTGTAGAATTATATGTAGGAGGGAACCAAATAAGCGGAACTTTTCCGTCTTCAATATCCAACCTCACTGGATTGCAAATGTTTGATATATCATATAATACTTTTAATGGGCCAATACCTTTAAACTTGAGTGGAGTTCACGATTTGGATTTTCTTTCATCGTTAACCAACTGTACCCAATTGTCAGTGATCTTTGCTTTTCACAATAATTTTGGTTGTGTGTTGCCGAATCTTATAGGAAACTTTTCCACTCATCTTCGTAATTTTGGACAACTAATCGGTTTAACCGTCTTAGTCATTGCAAACAATTTCCTTGAGGGAACAATTCCAAATTCAATTGGAAAGCTTAAGAATCTAGGAGTATTGGACTTAGATAATAACAAATTCTTCGGTAACATTCCTATAGTCATTGGCAATCTTAGTGTGTTGTCTGATTTGTATCTAGATAGCAATAAATTGGAAGGAAATATTCCAATTTCCATTAGAAATTGCACCCAATTACAGTTTTTATCTTTTTCAAGTAACAAATTGAGTGGTGATATACCCAGTCAAACATTTGGCTATTTAGAGTCTTTAATAGAACTTGACTTTTCCAACAACTCCTTGACTGGTCCCATTCCTTCTGAGTTTGGTAATCTGAAGCATCTTTCTCATTTGTATCTAAGCTTGAATAAGTTGTCTGGTGAAATTCCTAAGGATTTAGCTTCTTGCCTACAATTGACAGAACTAGGGCTGGGTAGAAACTTCTTCCATGGAGCTATACCTTTGTTCTTCAGCTCCTCTTTAAGGTCCCTTGAGAAATTAGATCTTTCTGAAAATAAATTTTCGAGCATAATCCCCTCTGAACTAGCAAATATAACATTTTTGAATGCTTTGAACTTGTCTTTTAACAATCTCTATGGTGAGGTTCCCACAGGAGGTATCTTTAGCAATGTTTCAGCAATTTCACTAATAGGAAACAAGAACCTTTGTGGAGGAATACCTCAATTGAAGCTTCATGCATGCTTTAAGGCACCCTCCAAGAAACACAAAAGATCTCTCAAACAGAAACTTATCATGATTAGTGTAATTGGTGGGGTTTTAATCTCTTGCATTGCTTTTCTAATTGTTCATTTCCTCACGAGAAAGCCTAAAAGATTACCTTCTTCACCATCTCTTCAAAATGGGCATTTGAGGGTTACTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGATCGGGAAGTTTTGGCTCTGTTTACAAAGGGTCTCTTTCTAACTTTGAAAGACCTATTGTTGTAAAGGTGTTAAATCTTGAAGCAAGTGGAGCAACAAAGAGTTTCTTAGCTGAATGTAAAGCTTTGGGAAAGATGAAGCACCGTAATCTTATCAAAATCCTAACATGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATAGTTTTTGAGTTCATGCCTAATGGGAGTTTAGAAAAGTTGTTGCATGATAATGAAGGGTCTAAAAATCATAATCTCAGCTTCACACAGAGGGTAGACACTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACAATGATGCAGGGAAAGTTGTAGTTCATTGTGACGTTAAGCCAAGCAATGTTCTTCTTGATGATGACAATGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCATGGAGCTACAGAACACTCAAGTAAAGATAAAGTTATTTCCTCCACAATCAAGGGAACTATAGGATATGTTCCTCCTGGGGGGCCTAGAAATGTTCAGCGTAATTGGAGACAAGACAATAAATTATTTGAATCCTGGAGAGATGGCTGTACAGGATTGTGTGTTCTTTCCTAG 2625 0.3688 MRFFMTLLLCFAFQMFVYWMLSATLTLALSSETDKHALLDLKEKLTNGEPVTCGRRHMRVSALHLENQTSWGGTLGPSLGNLTFLRILILKNVNLHGEIPKQVGRLKRLQVLDLRTNHLQGEIPIELTNCTNIKVIDFSFNQLITGRVPTWFGSMMQLTKLRLAHNHLVGTIPSSLGNVSSLKMLSLSGNHLEGSIPYSLGRLSGLTIIFLSLNNLSGEIPHSLYNLSNVQVFSLAENKLFGSLPTSMNLVFPNLVELYVGGNQISGTFPSSISNLTGLQMFDISYNTFNGPIPLNLSGVHDLDFLSSLTNCTQLSVIFAFHNNFGCVLPNLIGNFSTHLRNFGQLIGLTVLVIANNFLEGTIPNSIGKLKNLGVLDLDNNKFFGNIPIVIGNLSVLSDLYLDSNKLEGNIPISIRNCTQLQFLSFSSNKLSGDIPSQTFGYLESLIELDFSNNSLTGPIPSEFGNLKHLSHLYLSLNKLSGEIPKDLASCLQLTELGLGRNFFHGAIPLFFSSSLRSLEKLDLSENKFSSIIPSELANITFLNALNLSFNNLYGEVPTGGIFSNVSAISLIGNKNLCGGIPQLKLHACFKAPSKKHKRSLKQKLIMISVIGGVLISCIAFLIVHFLTRKPKRLPSSPSLQNGHLRVTYGELHEATNGFSSSNLVGSGSFGSVYKGSLSNFERPIVVKVLNLEASGATKSFLAECKALGKMKHRNLIKILTCCSSVDYNGEDFKAIVFEFMPNGSLEKLLHDNEGSKNHNLSFTQRVDTALDVAHALDYLHNDAGKVVVHCDVKPSNVLLDDDNVAHLGDFGLARLIHGATEHSSKDKVISSTIKGTIGYVPPGGPRNVQRNWRQDNKLFESWRDGCTGLCVLS* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1135 874 Gene3D Phosphorylase Kinase; domain 1 625 740 - -
Mal8g1135 874 Gene3D Transferase(Phosphotransferase) domain 1 741 857 - -
Mal8g1135 874 ProSiteProfiles Leucine-rich repeat profile. 518 539 IPR001611 GO:0005515
Mal8g1135 874 SUPERFAMILY L domain-like 337 579 - -
Mal8g1135 874 ProSiteProfiles Protein kinase domain profile. 659 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1135 874 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 49 844 - -
Mal8g1135 874 SMART LRR_typ_2 252 276 IPR003591 -
Mal8g1135 874 SMART LRR_typ_2 370 394 IPR003591 -
Mal8g1135 874 SMART LRR_typ_2 179 203 IPR003591 -
Mal8g1135 874 SMART LRR_typ_2 516 539 IPR003591 -
Mal8g1135 874 SMART LRR_typ_2 467 491 IPR003591 -
Mal8g1135 874 SMART LRR_typ_2 106 130 IPR003591 -
Mal8g1135 874 SMART LRR_typ_2 443 466 IPR003591 -
Mal8g1135 874 SUPERFAMILY Protein kinase-like (PK-like) 633 843 IPR011009 -
Mal8g1135 874 SMART serkin_6 659 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1135 874 SUPERFAMILY L domain-like 51 294 - -
Mal8g1135 874 Pfam Protein kinase domain 661 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1135 874 ProSitePatterns Protein kinases ATP-binding region signature. 665 688 IPR017441 GO:0005524
Mal8g1135 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Mal8g1135 874 SMART LRR_sd22_2 252 278 - -
Mal8g1135 874 SMART LRR_sd22_2 467 490 - -
Mal8g1135 874 SMART LRR_sd22_2 203 229 - -
Mal8g1135 874 SMART LRR_sd22_2 418 451 - -
Mal8g1135 874 SMART LRR_sd22_2 516 537 - -
Mal8g1135 874 SMART LRR_sd22_2 106 127 - -
Mal8g1135 874 Gene3D Ribonuclease Inhibitor 30 298 IPR032675 -
Mal8g1135 874 Gene3D Ribonuclease Inhibitor 299 598 IPR032675 -
Mal8g1135 874 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Mal8g1135 874 Pfam Leucine rich repeat 434 480 IPR001611 GO:0005515
Mal8g1135 874 Pfam Leucine rich repeat 493 553 IPR001611 GO:0005515
Mal8g1135 874 PANTHER LRR RECEPTOR-LIKE KINASE 49 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1135 Mal-Chr8 17433400 17444130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1135 26 843 Receptor kinase-like Gene Family AT3G47570 40.842 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1135 Pkinase 1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1135 - - mtr:MTR_1g029940 1212.21