Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1131 ATGAGAACTCATTTCACGTTTCTTCTCTATTTCTCAACTCAATTGCTGGTAACAGTTGCTCTTGCTTTGAATTTGAGTTCAGTGACTGATAAACATGCTTTGCTTTCTTTGAAAGGAAAGCTTACCAATAGTATACCTGATGCTCTTCCATCATGGAATGAATCTCTTCATTTCTGTGAATGGCAGGGTGTTACATGCGGTCGACGCCACATGAGAGTCTCTGTCTTGCATTTGGAAAATCAAAATTTGGGTGGTACTCTTGGACCATCCTTAGGAAATCTAACCTTTCTCAGAAAACTCAAACTTTCCAACATCAACTTGCATGGTGAAATTCCAAAAGAAGTTGGTCTTTTGAAGAGGTTGCAAGTTCTTGACTTGAGAAAGAACAATTTTCATGGTAAGATTCCTATTGAGCTTACCAATTGCACTAATCTTAAGGAAATTATATTGTTTTACAATCAACTCACTGGAAATGTTCCTTCATGGTTTGGTTCCATGATGCAACTTAATAAGTTGCTTCTTGGAGCAAATAATCTAGAGGGTACAATCCCACCTTCCTTAGGAAATATTTCATCACTCCAAAATATAACACTTGCAAGGAATCAACTACATGGAAGCATACCTTATTCATTGGGTAGGTTGTCAAGTTTGACAGAGCTGAACCTAGGTTTAAATCATTTGTCCGGTGAAATTCCTCATTCTCTTTACAACCTATCAAATATTCAAGTTTTTGTCCTTGGAGAAAACCAGTTATTCGGTTCTCTCCCATCAAATATACATCTCGCTTTCCCCAATCTTCAAGCCTTCTTCGTCGGAGGGAACCACTTAGGTGGGAATTTTCCATGTTCAATATCTAACCTCACTAGATTGCGAAGGTTTGATATATCATGGAATGGTTTCAATGGGCCAATACCTCCAACTTTTGGATCCTTAAACAATCTTCAAATTTTTCACATTGGCAATAATGATTTTGGGAGTGGAGGAGCTCATGATTTGGATTTCCTTTCCTCGCTAACCAATTGTACACTATTGCAAGAAATAATTTTGGAAAACAACAATTTTGGTGGCGTATTGCAAGATCATATAGGTTTAACAGGTTTTAATATGATGGAGAATTTACTTGAGGGGACAATTCCAGATTCAATTGGAATGTTGAAGAATATAGTAATATTGGTCTTGCAAGAAAACAAATTATTTGGTAACATCCCTGTTGTCATCGGCAATCTTACTCTGTTGTCCGAGCTTTATCTGCATACCAATAAATTAGAAGGAAACATTCCATTGACTCTTAGATATTGCACCAAGTTGCAATCATTTGGTGTTTCTAGCAACAACTTGAGTGGCGATATACCTGATCAAACATTTGGCTATCTGGAAGATTTAATAAATCTTGATTTGTCCAACAACTCCTTAACCGGTCCCATTCCTTCAGATTTTGGTAACTTCAAGCATTTTTCCATATTGTATCTATACAATAATAAGTTGTCAGGTCAAATTCCCAATGAACTTGCTGGTTGTTTGACACTAATAGAGCTTATGTTGCAGAGAAACTTTTTTCATGGAAGTATACCTTCCTTCTTTGGCACCTCATTGAGATCCCTCCAAATCTTAGACCTTTCTAGCAATAACTTCTCAAGCATAATCCCTCGTGAACTAAAAGATATGACATCATTGAGTATATTGAACTTGTCTTTTAACGATCTCTTTGGTGAAGTTCCCGTTGGAGGGATCTTTAATAACATCACAACAATTTCACTCATTGGAAATAAAGAACTTTGTGGGGGAATACCTCAATTGAAGCTAGTTGCATGCTCTAGATCACATTTAAAGAGACACAAAGGGCCTTTTAAAGTTATATTCATCATTATATTTGGCGGGGTTTTAGCATCATTTATAGTTTTTATTACTAAATGTTATCTAAGGAAAAAGACAAGAAAGTTATCTTCTTCGCCGTCTCTGCAAAATGGGCACTTGAGGGTTACTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTGGTAGGTACAGGAAGTTTTGGTTCTGTTTACAAAGGATCTCTTCTCTATTTTGAAAGACTTATTGTTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAGAAAAGAGTTTTATGGCGGAATGCAAAGCTCTAGGAAAGATGAAGCACCGAAATCTTGTCAAGATCCTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTAACGGGAGTCTAGAAAAGATATTGCATGATAATGAAGGCTCTGGAAATCATAATCTTAGCCTCAAACAAATGGTTGACATTGCTCTTGATGTAGCTCATGCACTTGATTACCTTCACAATGATACAGAGCATGTTGTAGTTCATTGTGATGTTAAACCAAGCAATGTTCTTCTTGATGATGACATGGTAGCCCACTTGGGAGACTTTGGTTTAGCTAGGCTAATTCATGGAGCCACAGGACATTCACCTAGAAATCAAGTTAATTCCTCTACAATTAAGGGAACTATAGGATATGTTCCTCCAGAGTATGGAGTAGGTGGTCCAGTATCACCTGAGGGAGATATCTACAGCTATGGGATTCTGCTATTAGAAATGCTCACTGGAAAGAGACCAACAGATAACATGTTTAATGAGAATCTAAGTCTACACAAATTCTGTAAGATGAAAATTCAAGAAGGAATTCTTGAGATAGTGGATCGTCCTTCGCTTATTCCATTTGTCGAAGATCAGTCACGGGTTGTGGAAAACAATATAAAGGAGTGTCTAGTTTTGTTTGCTAAAATAGGAGTTGCATGTTCTGAAGAATTTCCTTCTCAACGAATGCTCATAAAAGATGTTATAGTGAAGTTGCTTGAAATAAAACATAAGTTACCATGCTAA 2925 0.3685 MRTHFTFLLYFSTQLLVTVALALNLSSVTDKHALLSLKGKLTNSIPDALPSWNESLHFCEWQGVTCGRRHMRVSVLHLENQNLGGTLGPSLGNLTFLRKLKLSNINLHGEIPKEVGLLKRLQVLDLRKNNFHGKIPIELTNCTNLKEIILFYNQLTGNVPSWFGSMMQLNKLLLGANNLEGTIPPSLGNISSLQNITLARNQLHGSIPYSLGRLSSLTELNLGLNHLSGEIPHSLYNLSNIQVFVLGENQLFGSLPSNIHLAFPNLQAFFVGGNHLGGNFPCSISNLTRLRRFDISWNGFNGPIPPTFGSLNNLQIFHIGNNDFGSGGAHDLDFLSSLTNCTLLQEIILENNNFGGVLQDHIGLTGFNMMENLLEGTIPDSIGMLKNIVILVLQENKLFGNIPVVIGNLTLLSELYLHTNKLEGNIPLTLRYCTKLQSFGVSSNNLSGDIPDQTFGYLEDLINLDLSNNSLTGPIPSDFGNFKHFSILYLYNNKLSGQIPNELAGCLTLIELMLQRNFFHGSIPSFFGTSLRSLQILDLSSNNFSSIIPRELKDMTSLSILNLSFNDLFGEVPVGGIFNNITTISLIGNKELCGGIPQLKLVACSRSHLKRHKGPFKVIFIIIFGGVLASFIVFITKCYLRKKTRKLSSSPSLQNGHLRVTYGELHEATNGFSSSNLVGTGSFGSVYKGSLLYFERLIVVKVLNLETRGAEKSFMAECKALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMPNGSLEKILHDNEGSGNHNLSLKQMVDIALDVAHALDYLHNDTEHVVVHCDVKPSNVLLDDDMVAHLGDFGLARLIHGATGHSPRNQVNSSTIKGTIGYVPPEYGVGGPVSPEGDIYSYGILLLEMLTGKRPTDNMFNENLSLHKFCKMKIQEGILEIVDRPSLIPFVEDQSRVVENNIKECLVLFAKIGVACSEEFPSQRMLIKDVIVKLLEIKHKLPC* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1131 974 ProSiteProfiles Protein kinase domain profile. 672 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1131 974 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Mal8g1131 974 Pfam Protein kinase domain 674 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1131 974 SMART LRR_typ_2 118 142 IPR003591 -
Mal8g1131 974 SMART LRR_typ_2 555 580 IPR003591 -
Mal8g1131 974 SMART LRR_typ_2 409 433 IPR003591 -
Mal8g1131 974 SMART LRR_typ_2 531 554 IPR003591 -
Mal8g1131 974 SMART LRR_typ_2 458 481 IPR003591 -
Mal8g1131 974 SMART LRR_typ_2 214 238 IPR003591 -
Mal8g1131 974 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Mal8g1131 974 Pfam Leucine rich repeat 435 495 IPR001611 GO:0005515
Mal8g1131 974 Gene3D Ribonuclease Inhibitor 166 328 IPR032675 -
Mal8g1131 974 Gene3D Ribonuclease Inhibitor 330 605 IPR032675 -
Mal8g1131 974 SMART serkin_6 672 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1131 974 ProSitePatterns Protein kinases ATP-binding region signature. 678 701 IPR017441 GO:0005524
Mal8g1131 974 Gene3D Ribonuclease Inhibitor 29 143 IPR032675 -
Mal8g1131 974 ProSiteProfiles Leucine-rich repeat profile. 533 554 IPR001611 GO:0005515
Mal8g1131 974 Gene3D Phosphorylase Kinase; domain 1 634 753 - -
Mal8g1131 974 SUPERFAMILY Protein kinase-like (PK-like) 645 965 IPR011009 -
Mal8g1131 974 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 362 974 - -
Mal8g1131 974 PANTHER LRR RECEPTOR-LIKE KINASE 28 363 - -
Mal8g1131 974 SUPERFAMILY L domain-like 27 324 - -
Mal8g1131 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Mal8g1131 974 SUPERFAMILY L domain-like 336 594 - -
Mal8g1131 974 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 28 363 - -
Mal8g1131 974 Gene3D Transferase(Phosphotransferase) domain 1 754 972 - -
Mal8g1131 974 PRINTS Leucine-rich repeat signature 461 474 - -
Mal8g1131 974 PRINTS Leucine-rich repeat signature 531 544 - -
Mal8g1131 974 PANTHER LRR RECEPTOR-LIKE KINASE 362 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1131 Mal-Chr8 17357074 17360383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1131 29 971 Receptor kinase-like Gene Family AT3G47570 42.089 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal8g1131 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1131 - - gsj:114384365 1270.76