Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1113 ATGGTTAAATATAAGCACAAAACTGTCGTCCGTCGAACCCGAAAACTGTTATCATCTCTCTGTACACGCAAGATGAAAAGAAGAAAGGGAGGAGGAAGGTTACAACAAACTCTTCGCCTTCGAGTCGAATCCTGCAAATCAAGGTATTCATGCGGCGAAGAAATAGTAAAGCATCTCCGCTCAATTTATCCTGATGAATATCGCAGAATAGAATATAAAATATTTAGTAAATTAGTTGATGATGCCCTTAAATTCTCCAACAATATGGAGGGTCAAAGTGAATCTTATTCTCTAAAGAGACGTAAGAACATGGAAGACGAGGAAGAAGAAGAAGAAGAAGAAGAAGGATCGCTAGAGAAGAAAGAAACTTTGCAGATCACAAGAAGCTCGTCTAATTCTGTATTAGTTTCCGAGAAAGGGACGACGAATGATGTGAAGGTGAGATCGATAAAGAAAGGACTGATGTTTAATGATTTAGGTGGAATGAAAGAGACATTCAAGGAATTGAAGATGATTATTGCGCCAATGTTCAATCATAAGTTGCGTCAAGTGTTAGGAGTTAAACCTATTGGTGGCATTTTGTTATATGGACCACCTGGTTGTGGAAAGACTAGGCTAGCTCATGCTATAGCTTCCGAGATTGGTTGCAATTTCTATCCTACTTCTGCTACTGCTATGGTTTCTGGAGTCACAGGTGGCTCAGAAAATAATATTAGAGAGCTTTTCTCTACGGCTAAAAGGACTGCCCCGTCGATTATCTTTATTGACGAGATTGATGCAATTTCTTCGAAAAGAGATGATTTACAGCGTCAATCGGAGATAAGAATTGTGACGCAGATAATGATTTGTATGGATGAAGCTAATGATCATTCAGAGACTTCCGACAAACCTGATCTAGGCCATGTTCTTGTCATTGGAGCCACAAATAAGCCTAATGATATTGATCCTGCTCTGCGAAGGTTTGGTCGTTTTGATCGTGAGATTCCTGTTGGTATTCCTGATGAATCTGCTAGGGAGGAAATTCTTACTGTGGTTACTCGCAATCAAAAACACGACCATTCAATTGATTTGCAAAAAATTGCTGCATCTACGCCAGGATTTGTTGGTGCTGATCTTGAATCTCTTGCCAATGGGGCCGGCGTTGTGGCAATGAATAGGATAATTAATGAAACAGAACAAAAATTATCTCAAGATCTCACAAATGAGCCAGATGAAGACCGCTGGAAGAAACCTTTGTTGTTGCCTGAAGATGACTTAGAAAAATGTGCAATCACAATGTCTGATTTTGAGGAAGCAGCCAAAATGGTACAACCTTCATTGGCAAGAGAAGGATTCTCTCCCATTCCTAATGTTAAATGGGAAGATGTTGGTGCACTTGATCATGCAAAAGAACTGTTTCAGCTATACATTCTAGGGTGTATAAAACATCGCGATGATTATAAGGGGTTTGTGAAGAATCTTGAAACAGGAGTTTTACTTTATGGGCCTCCAGGCTGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGAGGCAAGAGCTAATTTCATTCATGTTAAGGGACCTGAGCTTTTAAATAAATTTGTTGGAGCAAGCGAGCATGAAGTCCGGACAATATTTAGTCGTGCCAGGACGTGTGCACCTTGTATAATTTTTTTTGACGAGGTGGATGCTTTGACAGCAGCACGCGGTGAAGAGGGTGGACGGGTTATTGAAGGAGTGTTGACCCAGTTGCTGATTGAGTTAGATGGCGCAGATCAGCGCAAAGGTGTTTTTGTGATCGGTGCAACAAATAGACCCTGGGCGATGGACCCTGCTGTCTTACGACCTGGTAGATTTAGTAAACTTCATTATGTTTCTCTTCCAAGCCCGGACGACCGTGTTAAAATATTGAAAACTCTTGCAAAGGGTAGGCTTATTGATGCCAGCGTGGATTTGAGTGCCATTGCAAGAATGGAAGATTGTGAAAACTTTAGTGGCGCGGATCTTGCCGCATTGATGGATGAAGCAGGGATGGCTGCTCTCATTGAGAAGTGGACCTCGACGGAGAAAAATAGTGGCACCATCAAGACATGTCATTTTGAGGCAGCACTAAGTAAAGTCTATCCTTCTGTGTCGAAAATGCAAATAGAGAACTATGAGCGTTTTTTAGAAGGCCTTAAAAAAGTAGACAAGCAGCAACAACAGCATCGCAACGACTTATTTCGTTCTTTAACAGTAAGTCATTGTAATGCATTGAATTGA 2244 0.4109 MVKYKHKTVVRRTRKLLSSLCTRKMKRRKGGGRLQQTLRLRVESCKSRYSCGEEIVKHLRSIYPDEYRRIEYKIFSKLVDDALKFSNNMEGQSESYSLKRRKNMEDEEEEEEEEEGSLEKKETLQITRSSSNSVLVSEKGTTNDVKVRSIKKGLMFNDLGGMKETFKELKMIIAPMFNHKLRQVLGVKPIGGILLYGPPGCGKTRLAHAIASEIGCNFYPTSATAMVSGVTGGSENNIRELFSTAKRTAPSIIFIDEIDAISSKRDDLQRQSEIRIVTQIMICMDEANDHSETSDKPDLGHVLVIGATNKPNDIDPALRRFGRFDREIPVGIPDESAREEILTVVTRNQKHDHSIDLQKIAASTPGFVGADLESLANGAGVVAMNRIINETEQKLSQDLTNEPDEDRWKKPLLLPEDDLEKCAITMSDFEEAAKMVQPSLAREGFSPIPNVKWEDVGALDHAKELFQLYILGCIKHRDDYKGFVKNLETGVLLYGPPGCGKTLIAKAVANEARANFIHVKGPELLNKFVGASEHEVRTIFSRARTCAPCIIFFDEVDALTAARGEEGGRVIEGVLTQLLIELDGADQRKGVFVIGATNRPWAMDPAVLRPGRFSKLHYVSLPSPDDRVKILKTLAKGRLIDASVDLSAIARMEDCENFSGADLAALMDEAGMAALIEKWTSTEKNSGTIKTCHFEAALSKVYPSVSKMQIENYERFLEGLKKVDKQQQQHRNDLFRSLTVSHCNALN* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1113 747 Gene3D - 333 443 - -
Mal8g1113 747 Pfam AAA+ lid domain 643 696 IPR041569 -
Mal8g1113 747 Pfam AAA+ lid domain 354 394 IPR041569 -
Mal8g1113 747 ProSitePatterns AAA-protein family signature. 591 609 IPR003960 GO:0005524|GO:0016887
Mal8g1113 747 SMART AAA_5 487 623 IPR003593 -
Mal8g1113 747 SMART AAA_5 189 334 IPR003593 -
Mal8g1113 747 MobiDBLite consensus disorder prediction 94 126 - -
Mal8g1113 747 CDD AAA 179 331 - -
Mal8g1113 747 Gene3D - 136 331 IPR027417 -
Mal8g1113 747 Gene3D - 449 714 IPR027417 -
Mal8g1113 747 Pfam ATPase family associated with various cellular activities (AAA) 491 619 IPR003959 GO:0005524|GO:0016887
Mal8g1113 747 Pfam ATPase family associated with various cellular activities (AAA) 193 330 IPR003959 GO:0005524|GO:0016887
Mal8g1113 747 CDD AAA 490 621 - -
Mal8g1113 747 PANTHER AAA-FAMILY ATPASE 41 716 - -
Mal8g1113 747 Gene3D - 622 699 - -
Mal8g1113 747 Coils Coil 101 124 - -
Mal8g1113 747 ProSitePatterns AAA-protein family signature. 302 320 IPR003960 GO:0005524|GO:0016887
Mal8g1113 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 717 IPR027417 -
Mal8g1113 747 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 41 716 - -
Mal8g1113 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1113 Mal-Chr8 17107852 17111854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1113 143 729 Calmodulin-binding Proteins AT3G56690 34.609 2.92e-112 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1113 K14571 - qsu:112005427 702.59