Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1094 ATGATCAATGCAAATTCGAATTCGAATTCAAACGGTGGTGATGAAAACGGTGACAAAGTGAGGGGTTCATGGAGTCAACAAGAAGACGAAACATTGGTGAAATTGGTGAAAGAAAACGGTGCAAGAAACTGGTCGGTGATAAGCAACGGAATCCCCGGTCGTTCAGGAAAATCATGCCGTCTGCGGTGGTGTAATCAGCTGAGTCCCTCCGTTCAACACCGTCCTTTCACTCCGGCGGAGGATAACATCATCATTCAAGCGCACGCAGTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCTGGTCGAACCGATAACGCGATAAAAAATCACTGGAATTCAACTCTCCGCCGTCGTCGCACGGAGGCGACAGCGGCTGCGCCGGTGATTCCTACTGGTGTGATAATCGGAAAACGGCCGAATGAAGGTTACGGTTTGTTGGATCTCGGTTACCGTTATAAACGTCCTTGCCTAGTTGTTGAGAATAATAACGGGTCACGTGGGTCACGTGAGGGTGAAGAAACGGTTACGGAAGAAGATGATGCGGGGAATGGTGGTAACGTCGTTACGACGTCGTTAAGTTTGTTTCCACCTGGTGAGAAATTTTTGAAAGAAGAAAAAGAAAAAGAAAAAGAGAAAAAAGAAAAAGAAATTGAAGAAGAATTTGATGATAAAAATTTCAAGTTACTGAAAAATGAGAATTTGAGGTCGATTCTTCAACGTATGATAGCAGAGGAAGTTAGGAATTATGTTGATAACATGCGCCTTAATGGGTTAGATCCTGCTTCAACACTTCGAAAGTGA 810 0.442 MINANSNSNSNGGDENGDKVRGSWSQQEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPSVQHRPFTPAEDNIIIQAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTEATAAAPVIPTGVIIGKRPNEGYGLLDLGYRYKRPCLVVENNNGSRGSREGEETVTEEDDAGNGGNVVTTSLSLFPPGEKFLKEEKEKEKEKKEKEIEEEFDDKNFKLLKNENLRSILQRMIAEEVRNYVDNMRLNGLDPASTLRK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1094 269 Pfam Myb-like DNA-binding domain 75 117 IPR001005 -
Mal8g1094 269 Pfam Myb-like DNA-binding domain 21 67 IPR001005 -
Mal8g1094 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 67 IPR017930 -
Mal8g1094 269 CDD SANT 23 65 IPR001005 -
Mal8g1094 269 MobiDBLite consensus disorder prediction 1 16 - -
Mal8g1094 269 MobiDBLite consensus disorder prediction 165 187 - -
Mal8g1094 269 Gene3D - 20 72 - -
Mal8g1094 269 PANTHER MYB PROTEIN-RELATED 6 234 - -
Mal8g1094 269 CDD SANT 75 118 IPR001005 -
Mal8g1094 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Mal8g1094 269 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Mal8g1094 269 Coils Coil 202 226 - -
Mal8g1094 269 ProSiteProfiles Myb-like domain profile. 16 67 IPR001005 -
Mal8g1094 269 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Mal8g1094 269 Gene3D - 75 121 - -
Mal8g1094 269 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 6 234 - -
Mal8g1094 269 SMART sant 20 69 IPR001005 -
Mal8g1094 269 SMART sant 72 120 IPR001005 -
Mal8g1094 269 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1094 Mal-Chr8 16785613 16786422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1094 17 134 MYB Transcription Factor Family AT3G50060 64.407 1.07e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g1094 Myb_DNA-binding 5.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1094 - - mtr:MTR_5g082910 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1094 8 16785613 16786422 Mal8g1094 8 16785613 16786422 ECH