Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1092 ATGTCAAACCCTGACATCAAAACATACGACTGGACCTTCGAACCCGAAGACGAACCACTCCATATCAAAGGCCACAAACTCCTCTTCTTCATCTCCATCTTCACCATCATCATCCTCTTCACAGCTCTCTTCCTTTGCTCCCGCTGGATCTTCCACAACCACCTCACACCACCATCTCATCCACCCACATTCTCCTCCCAATCTCAAGGCCTCGACGCCGACGCCATCAAGAAGCTTCCTATCATACTACACCAAACCAACTCTTCAAACCACAAGTTGGAGGAAACGGAATGTTGCATTTGTTTAAGCTCTTTTAGAGATGGTGAGAAGGTGAAAGTGTTACCAAGTTGTGATCATTGTTTTCATTGTGAGTGTGTTGATGCATGGCTTGTGAATCGTTCTAGTTGTCCTTTGTGTAGAGCTTCTCTTAAGATTGATTCAGATTTTCCTAAGATTTTGATTCAAGAACCACCTATTAGATATAATGTTCAAGTTTAA 498 0.4297 MSNPDIKTYDWTFEPEDEPLHIKGHKLLFFISIFTIIILFTALFLCSRWIFHNHLTPPSHPPTFSSQSQGLDADAIKKLPIILHQTNSSNHKLEETECCICLSSFRDGEKVKVLPSCDHCFHCECVDAWLVNRSSCPLCRASLKIDSDFPKILIQEPPIRYNVQV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1092 165 PANTHER RING-H2 FINGER PROTEIN ATL66 3 155 - -
Mal8g1092 165 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Mal8g1092 165 Pfam Ring finger domain 97 140 IPR001841 -
Mal8g1092 165 SUPERFAMILY RING/U-box 87 148 - -
Mal8g1092 165 SMART ring_2 98 139 IPR001841 -
Mal8g1092 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 145 IPR013083 -
Mal8g1092 165 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 155 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1092 Mal-Chr8 16754882 16755379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1092 16 147 C3H Transcription Factor Family AT3G11110 41.007 1.19e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1092 - - gmx:100794554 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2692 2 34830056 34830577 Mal8g1092 8 16754882 16755379 PCT