Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1091 ATGGATTTACATTCACCTCTTCATCATGTTCAAGAAACCAAACCCACCGCCAACACCGTTGTTACCACCACTCCAAGTGAAACATCTAACAACAGCACTGATAACAGCAGCAACAGCATTAAAAATAATAACCGTAAATCCAAAGGTAAAGGTGGACCTGATAACAACAAATTCAGATACCGTGGTGTAAGACAACGTAGTTGGGGTAAATGGGTTGCTGAAATTCGTGAACCACGTAAACGTACTCGTAAATGGCTTGGTACTTTTTCAACTGCTGAAGATGCTGCTAAAGCTTATGATCGTGCTGCTATTATTCTCTATGGTTCTAGGGCTCAGCTTAATCTTCAACCTTCAGCTTCATCTTCTTCCTCTCAAAACTCTTCATCTTCTTCTCGTAACTCTTCTTCTTCCAATTCCAATAATACCCTTCGTCCTTTACTTCCTCGTCCTTCTGGTTTCTCTCTTTACAATAATCTAGTTCCTTTTGGTGTTTACAATAATTTTCATCATCATCATCAACCAGTTTTCTATAATAACAATAATAGTTTAGTTCATTTTCATCATAATCCTCATCATGAAATGGTGCAAGTTCAAGTGCAACAACATCAACAATATCATCAACATCAAGATTTTGAACATGCAAGTGGTGATTCTGTTAAATCAATTACCTCGTATGGTCAGAATATTCACGATCAAGAGCAACATGCAAAACATGTTTTGGATCAACAACATGCACAACATGTTATGAATCAGCAACAACAACAGATGAATATTCAGAATTGTGTGGGGTCATCAAGTTTTGGTTGTTCTCAAAATAATAATGATATTGATGGAACAGTACTGGATCTGGATCCAGTTGGTGTTTGTGTTGGTTCTCCTAATTCTATGTGGCCAGCTTTGACAAGTGAGGAAGATTATACAACTAGTTTATGGGATTATAATGATCCTTTCTTCTTTGATTTTTGA 966 0.3685 MDLHSPLHHVQETKPTANTVVTTTPSETSNNSTDNSSNSIKNNNRKSKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAAKAYDRAAIILYGSRAQLNLQPSASSSSSQNSSSSSRNSSSSNSNNTLRPLLPRPSGFSLYNNLVPFGVYNNFHHHHQPVFYNNNNSLVHFHHNPHHEMVQVQVQQHQQYHQHQDFEHASGDSVKSITSYGQNIHDQEQHAKHVLDQQHAQHVMNQQQQQMNIQNCVGSSSFGCSQNNNDIDGTVLDLDPVGVCVGSPNSMWPALTSEEDYTTSLWDYNDPFFFDF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1091 321 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Mal8g1091 321 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Mal8g1091 321 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 319 - -
Mal8g1091 321 MobiDBLite consensus disorder prediction 11 46 - -
Mal8g1091 321 CDD AP2 59 116 IPR001471 GO:0003700|GO:0006355
Mal8g1091 321 MobiDBLite consensus disorder prediction 116 145 - -
Mal8g1091 321 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Mal8g1091 321 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 11 319 - -
Mal8g1091 321 MobiDBLite consensus disorder prediction 47 61 - -
Mal8g1091 321 Pfam AP2 domain 59 107 IPR001471 GO:0003700|GO:0006355
Mal8g1091 321 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Mal8g1091 321 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Mal8g1091 321 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Mal8g1091 321 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1091 Mal-Chr8 16737510 16738475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1091 45 321 AP2-EREBP Transcription Factor Family AT2G40220 44.850 3.77e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal8g1091 AP2 2.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1091 K09286 - gmx:100301892 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1091 8 16737510 16738475 Mal8g1091 8 16737510 16738475 ECH