Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1087 ATGAATGATCCTAGATCAAAGATGATGATATCTCCAGGTTTATTACCAGCTGAATCATTACTAGATTCATTGATTCTAATATCCAATGAAGTTAGTTCAATGGAGAAATTTCCATTAGTACAAATAAAAAACGTATCATCCATGATAAGAAGGATCAAGCTTCTTTCATCATTGTTTGAAGAGATTCAAGAATCAGATTCACCACTTCCACCTTCTTCAATCCTTTGCTTCATAGAACTCTTCTCTGTGATCACAAGAGTGAAGGTCTTGATCCAAGAATGCATAGATGGAAGCTTTCTTTGGAGTCTCATACAATTAGAGTTAATTTCAAATCAATTTTTTGTGCTTGTTAATGAAATGGGAAGAGCACTTGATATTCTTCCTCTAAATTTGCTTAATGTAGCACAAGATATAAAGGAGCAAGTTGAGCTTTTGCATAAACAATCCAAGAGAGTTGAACTTGAATTATTCATTGATCCTAGAGAAGTTCAAAGAAGGGAAAAGATTTTCGAAGTAATGTCGAAAAATTGCTTGCAAAACAAGAAAAACAACAATAAAGGGTTTGTTGATTTTGTGAAAGTGGAAGAAATAATGAGTAACATTGGTTTGAGAACTTTATCAGATTATGTTGAAGAAATATCAAAGTTAGAAGTTGAAGCACAGAATCAAGCAGGAACAGGTGGACTAATTGTTGTCTCAAATATAAACAATCTCATGTCACTTGTTTCATATACCAAATCAATGGTATTTAGAAATGATGGAGAATCAGAAGAGTGTAAGTCAATATCTATGCTTTTATACAACAAAAGTAAAATACATGATAATGATAGTTCTTCTTCATCTTCTTTTTCTCAATCCATGATGACGGTTAATATTCCGGACGAATTTCGTTGTCCGATTTCGCTAGACCTAATGAGGGATCCTGTGATTGTTTCATCAGGACACACTTATGATAGAATTTCAATTGCAGAATGGATTAACTCTGGTCACCATACTTGTCCTAAAAGTGGTCAAAGACTAATTCACACTGCTTTAATACCAAATTATGCATTGAAGAGCCTTGTTCATCAATGGTGCTATGAAAACAATGTCAAATTGAATGAGTCAATCACAAAAAGCAACAATAGTAGCAGCAAGAGGCACAAGAATGAGAATGCTATTGATCACATTTCAGCAAACAAAGCATCAAAAGATGCTGTCAAAATGACAGCAGAATTTCTTGTTGGAAAATTAGCAACCGGTTCAACCGATATCCAAAGACAATCCGCGTACGAGATTCGTCTGCTCGCGAAAACCGGTATGGACAACCGAAGAATCATAGCCGAGGTAGGCGCAATTCCGTTTCTAGTAACACTTTTAGTATCCAAAGATTCAAGAATCCAAGAACATGTTGTGACTGCATTGTTCAACCTATCGATCTACGACAACAACAAGGTTTTAATCATGGCAGCCGGAGCAATCGACAACATAGTTGAAGTGCTCGAATTCGGAAAAACAATGGAAGCAAGAGAAAATGCTGCTGCAGCAATATATAGTTTATCTATGATTGATGATTGTAAAGTTCAAATTGGAGCAAGTTCAAAAGCTATACCTGCATTAGTAGGACTATTAAAAGAAGGTACAATTATTGGTAAAAGAGATGCTGCAACTGCATTGTTCAATCTTGCAGTTTATAATCCTAATAAGTTGAGTATTGTTAAAAGTGGAGCAGTTACTTTGCTTGTTGAGTTGTTGATGGATGATAAAGCCGGTATAACCGACGATTCATTGGCGGTGCTTGCCGTGCTTTTAGGTTGCTCTGAGGGGTTGGAAGAGATAAAGAATAGTAAAAGTTTGGTGCCTCTTCTTATTGATCTTTTGAGATTTGGTTCAGTTAAAGGGAAGGAAAATTCAATAACACTTTTACTTGGATTGTGTAAAGAAGAAGGAGAATTGGTTGCAATGAGACTTTTGGCAAATCCAAGGAGTATTCCTTCTCTTCAAAGTTTGGCTGCTGATGGTTCTTTGAGAGCTAGGAGAAAGGCTGATGCATTGCTTAGGTTGCTTAATAGGTGTTGTTCTCAACCTCATCATTCTTTGTGA 2082 0.3588 MNDPRSKMMISPGLLPAESLLDSLILISNEVSSMEKFPLVQIKNVSSMIRRIKLLSSLFEEIQESDSPLPPSSILCFIELFSVITRVKVLIQECIDGSFLWSLIQLELISNQFFVLVNEMGRALDILPLNLLNVAQDIKEQVELLHKQSKRVELELFIDPREVQRREKIFEVMSKNCLQNKKNNNKGFVDFVKVEEIMSNIGLRTLSDYVEEISKLEVEAQNQAGTGGLIVVSNINNLMSLVSYTKSMVFRNDGESEECKSISMLLYNKSKIHDNDSSSSSSFSQSMMTVNIPDEFRCPISLDLMRDPVIVSSGHTYDRISIAEWINSGHHTCPKSGQRLIHTALIPNYALKSLVHQWCYENNVKLNESITKSNNSSSKRHKNENAIDHISANKASKDAVKMTAEFLVGKLATGSTDIQRQSAYEIRLLAKTGMDNRRIIAEVGAIPFLVTLLVSKDSRIQEHVVTALFNLSIYDNNKVLIMAAGAIDNIVEVLEFGKTMEARENAAAAIYSLSMIDDCKVQIGASSKAIPALVGLLKEGTIIGKRDAATALFNLAVYNPNKLSIVKSGAVTLLVELLMDDKAGITDDSLAVLAVLLGCSEGLEEIKNSKSLVPLLIDLLRFGSVKGKENSITLLLGLCKEEGELVAMRLLANPRSIPSLQSLAADGSLRARRKADALLRLLNRCCSQPHHSL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1087 693 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 444 486 IPR000225 GO:0005515
Mal8g1087 693 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 366 IPR013083 -
Mal8g1087 693 Coils Coil 135 155 - -
Mal8g1087 693 Gene3D - 367 541 IPR011989 -
Mal8g1087 693 ProSiteProfiles U-box domain profile. 291 365 IPR003613 GO:0004842|GO:0016567
Mal8g1087 693 Pfam U-box domain 292 362 IPR003613 GO:0004842|GO:0016567
Mal8g1087 693 SMART arm_5 599 640 IPR000225 GO:0005515
Mal8g1087 693 SMART arm_5 433 473 IPR000225 GO:0005515
Mal8g1087 693 SMART arm_5 474 515 IPR000225 GO:0005515
Mal8g1087 693 SMART arm_5 517 557 IPR000225 GO:0005515
Mal8g1087 693 SMART arm_5 558 598 IPR000225 GO:0005515
Mal8g1087 693 CDD RING-Ubox_PUB 296 338 IPR045210 -
Mal8g1087 693 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 528 570 IPR000225 GO:0005515
Mal8g1087 693 Pfam Armadillo/beta-catenin-like repeat 435 472 IPR000225 GO:0005515
Mal8g1087 693 Gene3D - 545 691 IPR011989 -
Mal8g1087 693 SUPERFAMILY ARM repeat 403 682 IPR016024 -
Mal8g1087 693 PANTHER U BOX DOMAIN-CONTAINING 17 690 - -
Mal8g1087 693 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 17 690 - -
Mal8g1087 693 SUPERFAMILY RING/U-box 282 366 - -
Mal8g1087 693 SMART Ubox_2 295 358 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1087 Mal-Chr8 16669770 16671851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1087 19 688 U-box Gene Family AT3G46510 37.444 4.37e-128 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1087 - - cam:101513231 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1087 8 16669770 16671851 Mal8g1087 8 16669770 16671851 ECH