Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1081 ATGATCAAGAACATGAATCTTTCTAGAGCTTTGTGGTTTGTAACAGTGTGTTTCTTGTTTCTTAACTTGAGTTTGTGCTGCTATTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAAGCAGAGAATAACTAGTGATCCCTTTGGTGCTTTGACAAATTGGGTTGATGATGAAGTTACTCTTGACCCTTGTGATTGGTTTGGAGTTGAATGCTCAGATAGAAATATTGTAGTCTTGAATTTGAAAGACCTTTGCCTTGAAGGAACTCTAGCACCAGAACTTGTGAACCTTGTTTACATAAAATCTATTATTTTAAGGAACAACTCTTTCGATGGGACCATACCTGAAGAAATTATAGGCTTGAAAGAATTGGAGATTTTGGATTTGGGATATAACAACTTTAGTGGACATTTAGATGCTAATTTTGGGCATAATATCTCATCACTAGCAATTCTTTTGCTAGACAACAATGAGCTCCTTGTTGGTTTCTCTCCCAAAATCAATGAATTGAAAATGTTTTCGGAGTATCAAGTCGATGAAAATCAGTTAATCAATGCAGCTAAGATGCCATCTTGTTCAGAAAGATCCATCACATTGCATGTTCATGGAAATGAAGGTCCTAGGAGCCTGTTGGAAGATCACAGACAACATCATCATCGTCCTTATCAATACCGTCATAATCGTACTTCACCTCTCTATAGATCTTCTCCTTCACCTCAGGCCGCGGCAGTACCACCAGTCGCGAATCCACCTCCTGATCAAAATGCTTCTGAAGATCCAACTAATAGCATATCATCAAAGAAAAATCAAGTGCCTATTTTTTCTGGAGTTATTATTGGTGGTGCTGTGTTTCTTGTTATTTCAACCATTGGTATATATCTTTGTAAAACCAACAAGATAGCTATTGTGAAACCTTGGACTACTGGAATAAGTGGACAGCTTCAGAAGGCACTTGTGACAGGTGTGCCAAAGCTAAATCGATTAGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTAATTCACCAATTGGTACATTGTACAAAGGAACTTTGTCTAGTGGAGTTGAAATTGCTGTAGCTTCTGTTTCAGTGACATTATCCAAGAGTTGGACAAAGGCTTTAGAAGCTGAATTTAGGAAGAAGATAGACACATTATCAAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATATTGTGAAGAAGAAGAAGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCTCCAAATGGAACACTGTTTGAGCATTTACACGTAAAAGAAGCTGAGCACTTGAACTGGGGATCAAGACTTAGAATTGCAATGGGAATGGCTTACTGCCTACAACATATGCATGAGGTGAACCCTCCTGTGGCTCTTACCAACCTGAATTCTTCGGCCGTCCACCTAACCGATGACCACGCCGCAAAAATCTCGGATTTAAGTTTCTCCAGCGAAATAGATTCATCTGAAAAGAAACCTGATGGTAGAAAACACATTGACATGATGCTATCAGCAAGTCCAGCAAGTAATGTGTATAGCTTTGGTGTTTTGTTATTTGAAATAGTTACCGGTCGAATCCCTTATTCGGTTAATAATAGCTCAGTTGAAAACTGGGCATCGCATTATCTAAAATGGGACAAACCTCTCAAGGAAATGGTGGATCAAACTCTAGCATCTTACCAAGAAGATCAATTGGAACAAGTTGCTGAATTGATAAGAGTTTGTGTTGATCCGGATTCGGAGAAGAGACCAATGATGAAGGAAGTTTGTGAGAGATTGAGAGAGATAACGAAAATGTCGCCTGAATTTGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCTGAGATTGAGATTTCTTCTGCATAA 1884 0.3848 MIKNMNLSRALWFVTVCFLFLNLSLCCYSLNEEGNALLKLKQRITSDPFGALTNWVDDEVTLDPCDWFGVECSDRNIVVLNLKDLCLEGTLAPELVNLVYIKSIILRNNSFDGTIPEEIIGLKELEILDLGYNNFSGHLDANFGHNISSLAILLLDNNELLVGFSPKINELKMFSEYQVDENQLINAAKMPSCSERSITLHVHGNEGPRSLLEDHRQHHHRPYQYRHNRTSPLYRSSPSPQAAAVPPVANPPPDQNASEDPTNSISSKKNQVPIFSGVIIGGAVFLVISTIGIYLCKTNKIAIVKPWTTGISGQLQKALVTGVPKLNRLDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASVSVTLSKSWTKALEAEFRKKIDTLSKVNHKNFVNLIGYCEEEEEPFTRMLVFEYAPNGTLFEHLHVKEAEHLNWGSRLRIAMGMAYCLQHMHEVNPPVALTNLNSSAVHLTDDHAAKISDLSFSSEIDSSEKKPDGRKHIDMMLSASPASNVYSFGVLLFEIVTGRIPYSVNNSSVENWASHYLKWDKPLKEMVDQTLASYQEDQLEQVAELIRVCVDPDSEKRPMMKEVCERLREITKMSPEFAVPKLSPLWWAEIEISSA* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1081 627 Gene3D Transferase(Phosphotransferase) domain 1 420 610 - -
Mal8g1081 627 SUPERFAMILY Protein kinase-like (PK-like) 321 599 IPR011009 -
Mal8g1081 627 SUPERFAMILY L domain-like 36 179 - -
Mal8g1081 627 Gene3D Phosphorylase Kinase; domain 1 311 419 - -
Mal8g1081 627 Gene3D Ribonuclease Inhibitor 29 231 IPR032675 -
Mal8g1081 627 PANTHER LRR RECEPTOR-LIKE KINASE 3 627 - -
Mal8g1081 627 MobiDBLite consensus disorder prediction 216 267 - -
Mal8g1081 627 Pfam Protein tyrosine and serine/threonine kinase 339 599 IPR001245 GO:0004672|GO:0006468
Mal8g1081 627 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Mal8g1081 627 PANTHER PROTEIN MALE DISCOVERER 2 3 627 - -
Mal8g1081 627 ProSiteProfiles Protein kinase domain profile. 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1081 Mal-Chr8 16626101 16629854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1081 1 599 Receptor kinase-like Gene Family AT5G16000 25.585 1.36e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mal8g1081 PK_Tyr_Ser-Thr 6.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1081 - - lja:Lj2g3v2794510.1 831.632