Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1078 ATGTATTGTAACTGTTTTCGTTGTAAATTTGCTTCAGTGGAGGATTTGGAGCACGAAGAATTGGTGTTAGAGGGTTCAAGGCATGGAAATATGAGGGAACTTAAGTCGTTTTTACGAAGAGGTGTGAATTTCAACTATCGTGATCATCATGGTTTAGCCGCACTTCATGTTGCGGCATTTAATGGGCACAAGGATGTGGATTTATTGCTTAGTGAAGCAGGATTGGACTTAGAATGTGAGGATGGTGAAGGTCATGTCCCCTTGCATATGGTCGTGGAGAGTGGTGATACTGAGACTGTTACAATTTTTGTTGACAAGGGTGTGAACCTTGATGCCATGAATAAGAGGGGTGTCAGTTGTCACACCTTTGTACAGGGCTAA 381 0.4252 MYCNCFRCKFASVEDLEHEELVLEGSRHGNMRELKSFLRRGVNFNYRDHHGLAALHVAAFNGHKDVDLLLSEAGLDLECEDGEGHVPLHMVVESGDTETVTIFVDKGVNLDAMNKRGVSCHTFVQG* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1078 126 ProSiteProfiles Ankyrin repeat profile. 50 82 IPR002110 GO:0005515
Mal8g1078 126 PANTHER ANKYRIN-3-LIKE 13 121 - -
Mal8g1078 126 Pfam Ankyrin repeats (3 copies) 34 112 IPR002110 GO:0005515
Mal8g1078 126 PANTHER SI:CH211-189E2.2 13 121 - -
Mal8g1078 126 SUPERFAMILY Ankyrin repeat 26 120 IPR036770 -
Mal8g1078 126 SMART ANK_2a 50 79 IPR002110 GO:0005515
Mal8g1078 126 SMART ANK_2a 83 112 IPR002110 GO:0005515
Mal8g1078 126 ProSiteProfiles Ankyrin repeat region circular profile. 83 115 - -
Mal8g1078 126 ProSiteProfiles Ankyrin repeat region circular profile. 50 81 - -
Mal8g1078 126 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Mal8g1078 126 Gene3D - 10 125 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1078 Mal-Chr8 16590949 16591668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1078 34 126 Ion Channels AT2G26650 34.409 5.82e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1078 - - aip:107608641 131.339