Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1072 ATGGGTGGAAATTCACCATGTGCTTCATGCAAGCTTCTTAGACGCAGATGCACACAAGATTGCACCTTTGCTCCTTATTTCCCTTCTCATGAACCCCAAAAGTTTGCCATAGTTCACAAGGTTTTTGGTGCTAGCAACGTTAGCAAAATGTTGCAGGAGCTTCCAATTCACCAAAGAGCAGATGCAGTGAGCAGTTTAGTCTATGAAGCAAATGCAAGGGTGAGAGATCCAGTTTATGGTTGTGTTGGAGCAATATCTTACTTGCAAAATCAAGTTTCTGAGCTTCAAATGCAACTTGCAGTTGCTCAAGCAGAGATACTATGCATCCAAATGCAAAATGAGCAAGTGATTCCAACACCACAAATCAACCAAGATCAGAAATCTAATTACTATATCCAAGATGAACTCACTCAATACCTTAATTATGGTTCTTCTTCTAGTAATAATGTAATTCATGATTCTCTTAAGAGAGATAATATGTATGGACATGATATGGTTTCTTGA 504 0.3849 MGGNSPCASCKLLRRRCTQDCTFAPYFPSHEPQKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQNEQVIPTPQINQDQKSNYYIQDELTQYLNYGSSSSNNVIHDSLKRDNMYGHDMVS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1072 167 Coils Coil 85 105 - -
Mal8g1072 167 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Mal8g1072 167 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Mal8g1072 167 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 1 161 - -
Mal8g1072 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1072 Mal-Chr8 16532889 16534133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1072 3 128 AS2 family AT2G30130 79.231 5.56e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal8g1072 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1072 - - lang:109360574 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2678 2 34460691 34461648 Mal8g1072 8 16532889 16534133 ECH
Mal8g1072 8 16532889 16534133 Mal8g1072 8 16532889 16534133 ECH
Mal2g2678 2 34460691 34461648 Mal8g1072 8 16532889 16534133 PCT