Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1068 ATGCAAAAAGAGCGAAATCCGCATCAAAATAAAACTAGTGGAAAGGAGACTAAATCTGTGGCTGAGATTCTAGCAAAGTGGAAGGAATACAATGAGAAACTATATAAAGATGATGGTAAACGGAAGTGTAAAGCACCGGCAAAAGGTTCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGGCCTCAAAACTCGGAGAATAAGTATCGAGGTGTTAGACAGAGGACTTGGGGGAAATGGGTTGCTGAAATTAGGGAACCAAATAGAGGGAGTAGACTTTGGTTAGGTACTTTTCATACTGCTCAAGAAGCTGCTCTTGCTTATGATTATGCTGCTAGAGCCATGTATGGTCCTTTTGCTTGCCTCAACTTTCCTCATATATCAGATTATAGCTCTATTAAGGCAATTTTTAAGGATTCTTCATTGGCTTCTGCTAGCAGTTGTTCTTCAGTGTCAACAACTCCTAAAACATCTGAGATACCAAAGATACCTGTAAATAAGAACAACGTTGATGAGCCTGCTGATATGTTAGACCCTGGTGGTGGTGGTGAAATTCAAGTTGAAGAGGGTGTATGTGATGAGATGGATCTATCATGGATTGATAACATAGACTTCAATGATGATTACTTCAAGAGTTTTTCAATGGATGATTTTTTTCAAGGGGATGAGCTTTTGGGCCATATAGATAATAATCCAATTGATGAATCTGGAGTGATGCAAGGTTTGGATAGTGATTTGAATCTTGATTCAAGAGGAATGTGA 759 0.39 MQKERNPHQNKTSGKETKSVAEILAKWKEYNEKLYKDDGKRKCKAPAKGSKKGCMKGKGGPQNSENKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFHTAQEAALAYDYAARAMYGPFACLNFPHISDYSSIKAIFKDSSLASASSCSSVSTTPKTSEIPKIPVNKNNVDEPADMLDPGGGGEIQVEEGVCDEMDLSWIDNIDFNDDYFKSFSMDDFFQGDELLGHIDNNPIDESGVMQGLDSDLNLDSRGM* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1068 252 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 168 - -
Mal8g1068 252 MobiDBLite consensus disorder prediction 41 70 - -
Mal8g1068 252 Pfam AP2 domain 67 116 IPR001471 GO:0003700|GO:0006355
Mal8g1068 252 MobiDBLite consensus disorder prediction 147 163 - -
Mal8g1068 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 168 - -
Mal8g1068 252 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
Mal8g1068 252 Gene3D AP2/ERF domain 66 126 IPR036955 GO:0003700|GO:0006355
Mal8g1068 252 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Mal8g1068 252 MobiDBLite consensus disorder prediction 147 171 - -
Mal8g1068 252 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Mal8g1068 252 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Mal8g1068 252 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Mal8g1068 252 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
Mal8g1068 252 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1068 Mal-Chr8 16401282 16402040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1068 11 159 AP2-EREBP Transcription Factor Family AT2G40340 53.548 1.82e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g1068 AP2 3.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1068 - K09286 mtr:MTR_5g083340 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1068 8 16401282 16402040 Mal8g1068 8 16401282 16402040 ECH