Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1062 ATGGACACTTCTACTAGAAAGAAGATCAACAAAAACAACACTCATCAAATTTTGCAACTTGGGATGAGAAATGCAGCAAAAAGTTCCAATTTTTACAACAACCCACTTCATTTTTTCAGGTTATTTTTCATTTACATCATCTGGGTCAATTTTTTACTGCTTCTTCCTGTGAAGCCAGTTTTGTGTGAAGAGCATTGGGATGGTGTTGTTGTAACACAATCAAATTTCTTAGCACTTCAAGCATTCAAAGAAGAGTTGATTGATCCAAAAGGGTTCTTGAGAAGCTGGAATGATAGTGGCTTTGGAGCTTGTTCTGGAGGTTGGGTTGGAATCAAATGTGCTCAAGGAAAAGTGATTATAATTCAGCTTCCATGGAAAGGGTTGAAGGGGAGAATCACTGAAAGGATTGGTCAACTTGAAGGTTTAAGAAAGCTTAGTCTTCATAATAACCAAATTGGTGGTTCAATCCCTTCATCATTAGGACTTCTCAACAATCTAAGAGCTCATGGACCTGAAATGAGAATTGATTGGCCAACAAGGATGAACATAGCACAGGGCATGTCTCGTGGCTTGTTATACCTACATTCACATGAGAACATTATACATGGGAACCTTACTTCAAGCAATGTGTTGCTTGATGAGAACACAAATGTTAAAATAGCAGATTTTGGTCTATCAAGGTTGATGACAACTGCTGCTAACTCTAATGTGATTGCCACTGCTGGGGCATTAGGATACCGAGCACCGGAGCTATCGAAGCTTAAGAAAGCAAACACGAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACAAGGAAGCCACCTGGTGAGGCAATGAATGGTGTGGACTTACCTCAATGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGTTGATTTGATGAGAGATTCATCCGCAAATGGTGATGAGTTGCTGAACACTTTGAAGCTTGCTTTGCATTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCTTATACTTCAGCAGCTAGAAGAGATCAGACCACAAATATCATCAGCAATTTCTAGTGATGAAGGAGCTATCCCTTCGACGAGTGAATAA 1116 0.4005 MDTSTRKKINKNNTHQILQLGMRNAAKSSNFYNNPLHFFRLFFIYIIWVNFLLLLPVKPVLCEEHWDGVVVTQSNFLALQAFKEELIDPKGFLRSWNDSGFGACSGGWVGIKCAQGKVIIIQLPWKGLKGRITERIGQLEGLRKLSLHNNQIGGSIPSSLGLLNNLRAHGPEMRIDWPTRMNIAQGMSRGLLYLHSHENIIHGNLTSSNVLLDENTNVKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVDLMRDSSANGDELLNTLKLALHCVDPSPSARPEVQLILQQLEEIRPQISSAISSDEGAIPSTSE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1062 371 SUPERFAMILY Protein kinase-like (PK-like) 162 353 IPR011009 -
Mal8g1062 371 Pfam Protein kinase domain 178 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1062 371 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Mal8g1062 371 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 47 167 - -
Mal8g1062 371 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 166 365 - -
Mal8g1062 371 Gene3D Transferase(Phosphotransferase) domain 1 165 365 - -
Mal8g1062 371 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 47 167 - -
Mal8g1062 371 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 166 365 - -
Mal8g1062 371 Gene3D Ribonuclease Inhibitor 68 164 IPR032675 -
Mal8g1062 371 Pfam Leucine rich repeat N-terminal domain 77 113 IPR013210 -
Mal8g1062 371 ProSiteProfiles Protein kinase domain profile. 55 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g1062 371 SUPERFAMILY L domain-like 74 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1062 Mal-Chr8 16310852 16313934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1062 166 353 Receptor kinase-like Gene Family AT3G51740 73.404 6.29e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal8g1062 Pkinase 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1062 - - gmx:100811174 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1062 8 16310852 16313934 Mal8g1062 8 16310852 16313934 ECH