Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1054 ATGTTGAAGAATAAGCCTCATATTAAGATTGTGGTTATTGGTCATGTCAACTCTGGGAAGTCAACCACTTGTGGTCATTTGATCCACAAGCTTGGATGTATTGACAAGCATGTCATCGAGAGTACCGAGAAAGAAGCTGCTGAGATGAACAAGGTTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGACATTTCTCTGCACAAGATTGAGACGAGAAGCTACTACTGCACTTTCATTGATGTGCCCGGACACAGGGATTTCATTAAGAACATGATCAACGGGACGTGCCAAGCTGATTGTGCTCTTCTCATCATTGATTCCACTACTGGCGGATTTGAAGCCGGTTTTTCCAGGCATGGTCAGACCCGTGAACATGTTCTTCTTGCCTTCACACTTGGTGTAAATCAAATGATCTGCTGCTTGAACAAGATGGATGCCACTACACCCAAATACTCCAGGAATAGGTTTGTAGAAATTGTGTTGCCACTTTTAGCCTTTTTGAGGATGGTTGGCTATAACCCATATAAAGTTCCATTTGTTCCCATCTCTAGTTTTGAGGGAGATAACTTGATTGAGCGCTCTGCTAATCTTTACTGGTACACGGGTCCAACCCTACTTGAAGCTCTTGACCAAATCAACGAGCCTAAGAGGCTATCAGACAAGCCTCTCCGAATACCACTTCAGGATGTCTACCATATTGGAGGAATCGGAACTGTGCCTGTGGGACGTGTTGAAACTAGTTCCTTGATCCCTGGAATGTTGGTGACTTTTGCCCCACCTGAGCTGCAAGCTGAAGTGAAGTCTGTGGAGACGCAACTTCCTGGTGACATTGTGGGATTTAATGTTGATGTTCCTGCCGGGGATCTCAAGCGAGGCGATGTTGTGTCAAACTTCCATGATGACCCAGCAAATGAGGCCGCTCACTTTGCATCTCATGTTATCATCATGAGTAATTACCCTGGCCAGATTGTAAATGGCTATACAGCTGTTCTTGACTGCCACACCTCCCACACTGCTGTCAAGTTTGCTAAGATTTTTGCAAAGGTTGACAGTCGTGGTAATGAAATTGAGAATGAGCCCGAATTCTTGAAGCGTGGTGATGCTGGTTTTATTAAGATGATTCCCACCAAGCCTATCGTGGTAGAGCCTTTCCATATGTATCCTCCACTCGCCCGTTTTACTGTTAGAGACATGCATCAAATTGTGGCTGTTGGTGTTGTCAAGTCTGTGACAAGGAAGAGTTATGTAATTAAGTATGGTCTGTGTGTCGAGGAAGGTGAAGTATAA 1320 0.4462 MLKNKPHIKIVVIGHVNSGKSTTCGHLIHKLGCIDKHVIESTEKEAAEMNKVSFKYAWVLDKLKAERERGITIDISLHKIETRSYYCTFIDVPGHRDFIKNMINGTCQADCALLIIDSTTGGFEAGFSRHGQTREHVLLAFTLGVNQMICCLNKMDATTPKYSRNRFVEIVLPLLAFLRMVGYNPYKVPFVPISSFEGDNLIERSANLYWYTGPTLLEALDQINEPKRLSDKPLRIPLQDVYHIGGIGTVPVGRVETSSLIPGMLVTFAPPELQAEVKSVETQLPGDIVGFNVDVPAGDLKRGDVVSNFHDDPANEAAHFASHVIIMSNYPGQIVNGYTAVLDCHTSHTAVKFAKIFAKVDSRGNEIENEPEFLKRGDAGFIKMIPTKPIVVEPFHMYPPLARFTVRDMHQIVAVGVVKSVTRKSYVIKYGLCVEEGEV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1054 439 Gene3D Translation factors 230 308 - -
Mal8g1054 439 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 1 425 - -
Mal8g1054 439 PANTHER TRANSLATION FACTOR 1 425 - -
Mal8g1054 439 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 230 IPR000795 GO:0003924|GO:0005525
Mal8g1054 439 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mal8g1054 439 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal8g1054 439 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Mal8g1054 439 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mal8g1054 439 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mal8g1054 439 Pfam Elongation factor Tu C-terminal domain 314 421 IPR004160 -
Mal8g1054 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Mal8g1054 439 CDD EF1_alpha_III 315 418 - -
Mal8g1054 439 CDD EF1_alpha 10 227 - -
Mal8g1054 439 Gene3D - 1 226 IPR027417 -
Mal8g1054 439 SUPERFAMILY Translation proteins 231 313 IPR009000 -
Mal8g1054 439 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mal8g1054 439 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 318 421 IPR009001 -
Mal8g1054 439 Gene3D Translation factors 314 422 - -
Mal8g1054 439 Pfam Elongation factor Tu GTP binding domain 5 222 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1054 Mal-Chr8 16121645 16123051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1054 1 424 Eukaryotic Initiation Factors Gene Family AT5G60390 73.441 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1054 K03231 - gmx:100801611 620.928