Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1051 ATGGGCTGGACACGTTGCTTTCTTCTACAAATTTTTATTTCAGTCGCTTTTATCTCTCGCATAGATGGACATAAGAAGGCGGATCAGGGATTTGTTGAGGTTGATGGTGAGGCTTACCCGATGTGGTTTCCTGCTAGTGATCGCGCCTTGGTTTCTCAGCTCGGTCGAGTCAAACCCAACACAATAGTAGCCAAGGATGGTAGTGGTCAGTTTAAAACGATCACAGAGGGTATTAACTCGTGCCCCAAGGACCATCAAGGAAAATACATTATCTACATTAAAGCCGGTATCTACGAGGAGGACATTACGGTTAATCATACCAAAAATAACATCCTCTTGTACGGCGATGGGCCTACCAATACCATTATCACCGGGCGCAAGAACACTCGTGAAGGACTCACAACACCGCAAACCGCCACATTCTCTGTCATTGGCAATGGTTTCATTGCAAAGTCAATTGCCTTTGAGAATGCAGCTGGTCCCGGAGGTGAGCGAGATGTAGCTCTTCACGTTTCAGGTGACCGGTCAGCATTCTTCAAGTGTACAATTCGTGGCTATCAAGACACATTATATGTAGACCGGGGCTTTCAATTCTACCGTAACTGCGAGATATCGGGAACCATCGATTTCATCTTTGGCCAATCTACTACCTTGATCCAGAACTCACTAATCTTGGTGAGGAGGCCCAACCCGGGACAAGAGAACGTCGTGGTAGCAGATGGAACATCCCAAAATAGCGGGTTCAGAACTGGTATAGTCCTACAAAACTGCTCTATCATGCCAGACGCAGAGCTAATATCTTATATGTTGACAGTGAAGACGTATTTGGCAAGGCCATGGAAAGAGTTTTCAACGGTAGTTTTCCTGAACAATCGTATTGGGAATTTTATTCAACCGGAGGGTTACATGATTTGGAACAAAACTCACCCCAACACTGTACATTCTTACTTTGCCGAGTTCGGCAATACTGGACCAGGTGCCAAAGCTACAGCAAGGGTTAAATGGGCCAAAGGTATTATTACTAAGGCTGAGGCTCTTAAATTCACCGCTGAACCGTGGATTCATGCGAGCACATGGTTGCCTTCCACCGGTATTCCGTACGATCCTGGCTTCGAAGATTCACATTAA 1128 0.4583 MGWTRCFLLQIFISVAFISRIDGHKKADQGFVEVDGEAYPMWFPASDRALVSQLGRVKPNTIVAKDGSGQFKTITEGINSCPKDHQGKYIIYIKAGIYEEDITVNHTKNNILLYGDGPTNTIITGRKNTREGLTTPQTATFSVIGNGFIAKSIAFENAAGPGGERDVALHVSGDRSAFFKCTIRGYQDTLYVDRGFQFYRNCEISGTIDFIFGQSTTLIQNSLILVRRPNPGQENVVVADGTSQNSGFRTGIVLQNCSIMPDAELISYMLTVKTYLARPWKEFSTVVFLNNRIGNFIQPEGYMIWNKTHPNTVHSYFAEFGNTGPGAKATARVKWAKGIITKAEALKFTAEPWIHASTWLPSTGIPYDPGFEDSH* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1051 375 PANTHER PECTINESTERASE 16 371 - -
Mal8g1051 375 SUPERFAMILY Pectin lyase-like 58 369 IPR011050 -
Mal8g1051 375 Gene3D - 54 371 IPR012334 -
Mal8g1051 375 PANTHER PECTINESTERASE 16 371 - -
Mal8g1051 375 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Mal8g1051 375 Pfam Pectinesterase 61 356 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1051 Mal-Chr8 16109054 16110864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1051 35 371 Carbohydrate Esterase AT3G62170 45.251 1.38e-106 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1051 K01051 - gmx:100808559 438.728