Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1034 ATGTCCAGAGAAAGGGAGAGATTTTTTGATGAGATAGGAAAGAAGAGGGAGGGTGATGATTCTTTTCAAAAGGGAAGAATGTTAAGTACTTCTGGAACGCTAAATACCACAACTCCTTGTGCTGCATGTAAGCTTTTGAGACGAAGATGTGCACAAGAATGCCCTTTTTCTCCATATTTCTCTCCTCATGAGCCTCAAAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCCAGCAACGTATCAAAGATGCTATTGGAGGTACCAGAAAATCAAAGAGCAGATGCAGCAAATAGTTTAGTTTATGAAGCAAATGTAAGGCTAAGAGATCCAGTTTATGGCTGCATGGGTGCAATTTCATCTTTGCAACAACAAGTTCAATCATTATTAGGTGAACTTAATGCTATAAGGGAAGAATTACATAAATACAAACTCATGGAAGCTAACATGCTTCCTTCTTCAGAAGATGTATCAATTGCTACTTTGCCACCTCCAACATCACTACCAATGCTTCCTTCTTCCATTTACACACAACAGGCAAATCCTACCAATTATAGCTCAATTTCAAGTGATCATATTTCTTATTTTGATTAA 591 0.379 MSRERERFFDEIGKKREGDDSFQKGRMLSTSGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLLEVPENQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLLGELNAIREELHKYKLMEANMLPSSEDVSIATLPPPTSLPMLPSSIYTQQANPTNYSSISSDHISYFD* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1034 196 Pfam Lateral organ boundaries (LOB) domain 39 135 IPR004883 -
Mal8g1034 196 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Mal8g1034 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 25 196 - -
Mal8g1034 196 Coils Coil 118 138 - -
Mal8g1034 196 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1034 Mal-Chr8 15686382 15688104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g1034 32 157 AS2 family AT2G40470 80.620 1.02e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal8g1034 LOB 9.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1034 - - gmx:100786324 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g1034 8 15686382 15688104 Mal8g1034 8 15686382 15688104 ECH