LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal8g1010	ATGAGGAAGAGAGAGAGGGAAAATCCTTGTGGGGTATGTGGGCACTATCACAAAGTTGAAGAAGGTGAAGTGTGTGGGATTTGTGGTCATACGGTTCCGGTTGGATCGGAGAAGAGTTCTTTGCAAGTTAGTGCTTTTCCTTCTGTGATCTTACCGGAGTTTCTTTACTTGGGAAGCTATGATAATGCTTCGAGGTCTGAACTGCTTAAAACTCAGGGGATTTCACGTATCCTCAATACTGTCCCTTCTTGTCAAAATCTCTACAAGAACTCATTTACCTATCACTGCCTCCCAGATGACAAATCTTTCCAATTTGATGAAGCAAACCAGTTTCTGGAGCAATGTGAGAGGGATAAGGAGCGTGTTCTGGTTCATTGCATGTCAGGAAAGAGTAGGTCCCCAGCTGTTGTGATTGGCTACCTGATGAAGTCTAGAGGATGGAGACTAGCTCCGAGTTATCAGTGGGTAAAGGAACGTAGACCTGCGGTTGAATTGTCTGAAGGTGCTCACCAGACACTACAGGAGTACGAAAAACAGCTATTTGGATCAGTTGGAAGCTCTCTGCCGTCTGCTGGTTTTTTACCTGCAGGAGCGCCATCACTTAGCTTTGGCTTCCCAAAGACAAATGATCTAGCTCCACTTCCTGCCTTCGGCTGCACTACGACTCCTTCAATTTTCACTCGAGCACCCTCCGACATAGCTCCTCCCAATTTCACATTCGGAGCTGGTCAGAGTGTCACTGGAAGTAGTCCTTTTAATACGAATCCACCTAATCCTAATGGAACTGATATTCAAATGGATGGATCGTGA	810	0.458	MRKRERENPCGVCGHYHKVEEGEVCGICGHTVPVGSEKSSLQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKSFQFDEANQFLEQCERDKERVLVHCMSGKSRSPAVVIGYLMKSRGWRLAPSYQWVKERRPAVELSEGAHQTLQEYEKQLFGSVGSSLPSAGFLPAGAPSLSFGFPKTNDLAPLPAFGCTTTPSIFTRAPSDIAPPNFTFGAGQSVTGSSPFNTNPPNPNGTDIQMDGS*	270

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal8g1010	269	Gene3D	Protein tyrosine phosphatase superfamily	40	185	IPR029021	-
	Mal8g1010	269	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	47	181	IPR029021	-
	Mal8g1010	269	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	105	171	IPR000387	GO:0016311\|GO:0016791
	Mal8g1010	269	CDD	DSP_plant_IBR5-like	47	176	-	-
	Mal8g1010	269	PANTHER	PROTEIN-TYROSINE-PHOSPHATASE IBR5	1	269	IPR044212	GO:0009734\|GO:0009738\|GO:0033549\|GO:0043407
	Mal8g1010	269	PANTHER	PROTEIN-TYROSINE-PHOSPHATASE IBR5	1	269	-	-
	Mal8g1010	269	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	46	182	IPR020422	GO:0006470\|GO:0008138
	Mal8g1010	269	ProSitePatterns	Tyrosine specific protein phosphatases active site.	124	134	IPR016130	GO:0016311\|GO:0016791
	Mal8g1010	269	SMART	dsp_5	46	179	IPR020422	GO:0006470\|GO:0008138
	Mal8g1010	269	MobiDBLite	consensus disorder prediction	242	269	-	-
	Mal8g1010	269	Pfam	Dual specificity phosphatase, catalytic domain	55	179	IPR000340	GO:0008138\|GO:0016311

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal8g1010	1	166	Protein tyrosine phosphatase (PTP) family	AT2G04550	74.556	1.21e-95	277

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal8g1010	K04459		-	gmx:100808721	429.483

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal8g1010	8	15103611	15107454	Mal8g1010	8	15103611	15107454	ECH