Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1006 ATGGCAACTCTTTCACTTTCTCTGCATAATCTAAACTTCTTTCTCTTCCACCACCCTTCTTCTACACACCAAAACCCCAATTTCTCACGCCAAAACCCCATTTTCTTGCACCAAAACCCATCAATTTCTTTCAAATCTCCAACATGTTCAAAATCCACCAACATTCCTTCTCTTTCTCCAATCCAAATCCCACGCTCCACAAGAATCCAAGCACAACGCGCTCTAATGGATTATCTTCACTACACTCGAAACTACACTTTCACTGACGCTGAATTCATCTCCAAAAACTCTCCACGTTTCCTCAATTTCCTCATCTCCCAAATCAAAATCCCCAAAGACCGTGACGTTACTCGAGCTCTCACAAGGTATCTTAGGTATCACCCCATTAATGAATTTGAACCCTTTGTAGAGAGTTTAGGGATTAAGCAATCAGAATTGATTCAAATGCTTCCTAAAGGTTTGATTTTTATGAGTGATGATAGTGTTTTAGTTGATAATTTTCATGTTCTTTGTAATCATGGGGTTCCGAGGAATCGAATGGCGAAGATTTATAAAGAAGCAAGAGAGGTTTTTGGGTATGAAAGTGGTGTTTTGGCAAAGAAATTTCAAGATTATGAAGATTTGGGGTTGAGTAAATCTTCTCTCATTAAGCTTTTTGTTTGTTGTCCTTTGCTTTTGGTTGGTGATGTTGATTCTGAGTTTGTTGTTGTTCTTGATTGGTTGAAGAAAATTGGGATTAAGAGTGAATGGTTTGTGAATTGTATGTGTAGTTCAAAAGATTATAGTTGGAAAAGAATGATTGATACTATAGAATTTTTTCATAAAGTGGGGTATTCTGAGAAACATATGTATGATTTGTTTAAGGCGGATCCGAAATTGTTGTTGGAAGCTTTAGGGAAGAAGATGTATTTGTTTTTGGGCCGGTTGATTAAGACAGGTGTTGACGTGAATGTGGTTTGTTCTTGTTTCGTAGAGCATTCGGATATGTTGTCGAGTAAGTGTATGGATAATTTGATGACTGTGATTTCTTTTTTGTATAATATTCGAATGGAACAAGATGATATGGTACATGTTTTGTCCAACTACATGCATATTTTTAGCAAAGTTTCGATAAAAGGTTCTCTAACGGTTTGTAAGGAGTTAGGAGTTGGAAAAGCTGATTTATGCAGTATCATAAAGGAAGATCCATTAGAGTTTATTAGTTTGGCTTTGAAACCGGAGCAGAAGAGGACTAGAGGGCGAGGCTATTGTGACCTGCATAGTAATATGGAGAAAACAACTTTCTTGTTGAAACTGGGGTATATGGAAAACTCTGAGGAGATGGAAGCAGCAGCGAAGTTGTTTAAGGGGAGAGGTGATCAGTTACAAGAGAGGTTGGATTGCCTGGTAGAAGCTGGTTTGGATTGTAACACTGTGATTAGAATGATAAAGCGAGATCCTGGGATTCTAAGCATGAAGAGAAATGTAATTCAAAAGAAGATTGATTTCGTAAAAAACACTTTAGGTTTCCCGATAGAATTTGTTGTGAGATACCCAACATACTTTACCCATGATTTGGGCAAAATTAGTGCAAGATTTTCAATGTATGAGTGGTTGAAGGAAAGGAATGTTGTAAATCCTGCGTCAACCTTGAGTACCATAGTTTCATCTAATGAAAAAAAGTTTGTAAAACACTTTGTGAATATGCATCCTGAAGGTCCAACAGTCTGGCAAAGTATAAAAAGTTTATCAAACAAAGATCAGAATTAA 1749 0.3694 MATLSLSLHNLNFFLFHHPSSTHQNPNFSRQNPIFLHQNPSISFKSPTCSKSTNIPSLSPIQIPRSTRIQAQRALMDYLHYTRNYTFTDAEFISKNSPRFLNFLISQIKIPKDRDVTRALTRYLRYHPINEFEPFVESLGIKQSELIQMLPKGLIFMSDDSVLVDNFHVLCNHGVPRNRMAKIYKEAREVFGYESGVLAKKFQDYEDLGLSKSSLIKLFVCCPLLLVGDVDSEFVVVLDWLKKIGIKSEWFVNCMCSSKDYSWKRMIDTIEFFHKVGYSEKHMYDLFKADPKLLLEALGKKMYLFLGRLIKTGVDVNVVCSCFVEHSDMLSSKCMDNLMTVISFLYNIRMEQDDMVHVLSNYMHIFSKVSIKGSLTVCKELGVGKADLCSIIKEDPLEFISLALKPEQKRTRGRGYCDLHSNMEKTTFLLKLGYMENSEEMEAAAKLFKGRGDQLQERLDCLVEAGLDCNTVIRMIKRDPGILSMKRNVIQKKIDFVKNTLGFPIEFVVRYPTYFTHDLGKISARFSMYEWLKERNVVNPASTLSTIVSSNEKKFVKHFVNMHPEGPTVWQSIKSLSNKDQN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1006 582 Gene3D Transcription termination factor 3, mitochondrial 302 572 IPR038538 -
Mal8g1006 582 Gene3D Transcription termination factor 3, mitochondrial 93 301 IPR038538 -
Mal8g1006 582 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 45 574 - -
Mal8g1006 582 PANTHER CGI-12 PROTEIN-RELATED 45 574 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 SMART mt_12 505 538 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 SMART mt_12 438 468 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 SMART mt_12 216 247 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 SMART mt_12 181 211 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 SMART mt_12 473 504 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 Pfam mTERF 270 401 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 Pfam mTERF 135 231 IPR003690 GO:0003690|GO:0006355
Mal8g1006 582 Pfam mTERF 441 555 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1006 Mal-Chr8 15056303 15058051 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal8g1006 mTERF 3.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1006 - - gmx:100803162 662.914